RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ZNF420Q8TAQ5 688 aaPredicted RBP18.95■□□□□ 0.62
TRAF4-207ENST00000461195 CIB1Q99828 191 aa18.95■□□□□ 0.62
TRAF4-207ENST00000461195 YIPF3Q9GZM5 350 aa18.95■□□□□ 0.62
TRAF4-207ENST00000461195 MRPL15Q9P015 296 aaKnown RBP18.95■□□□□ 0.62
TRAF4-207ENST00000461195 LAMP5Q9UJQ1 280 aa18.95■□□□□ 0.62
TRAF4-207ENST00000461195 IGHV3-64DA0A0J9YX35 117 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 CCDC182A6NF36 153 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 CD200P41217 278 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 GATA4P43694 442 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 TMEM155Q4W5P6 130 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 FAM57BQ71RH2 274 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 PRSS45Q7RTY3 260 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 LRRC28Q86X40 367 aaPredicted RBP18.94■□□□□ 0.62
TRAF4-207ENST00000461195 TCEANCQ8N8B7 351 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 OR56B2PQ8NGI1 322 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 OR10A2Q9H208 303 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 PCDHB10Q9UN67 800 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 KLHDC2Q9Y2U9 406 aa18.94■□□□□ 0.62
TRAF4-207ENST00000461195 CUBNO60494 3623 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 SAC3D1A6NKF1 404 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 LRRC30A6NM36 301 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 PLPP2O43688 288 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 GMDSO60547 372 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 ALOX5APP20292 161 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 CFL1P23528 166 aaKnown RBP18.93■□□□□ 0.62
TRAF4-207ENST00000461195 DDOSTP39656 456 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 MAB21L1Q13394 359 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 ZMYND11Q15326 602 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 ZNF181Q2M3W8 571 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 ZFP1Q6P2D0 407 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 KLHL36Q8N4N3 616 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 ERGIC1Q969X5 290 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 SGK3Q96BR1 496 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 REEP6Q96HR9 211 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 PGAM5Q96HS1 289 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 ADAT1Q9BUB4 502 aaKnown RBP18.93■□□□□ 0.62
TRAF4-207ENST00000461195 OSBPL10Q9BXB5 764 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 NIPAL2Q9H841 368 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 BRD7Q9NPI1 651 aa18.93■□□□□ 0.62
TRAF4-207ENST00000461195 H2AFY2Q9P0M6 372 aaPredicted RBP18.93■□□□□ 0.62
TRAF4-207ENST00000461195 M0R129 80 aa18.92■□□□□ 0.62
TRAF4-207ENST00000461195 MRPL3P09001 348 aaKnown RBP18.92■□□□□ 0.62
TRAF4-207ENST00000461195 MDH2P40926 338 aaKnown RBP18.92■□□□□ 0.62
TRAF4-207ENST00000461195 HCCSP53701 268 aa18.92■□□□□ 0.62
TRAF4-207ENST00000461195 EFNB1P98172 346 aa18.92■□□□□ 0.62
TRAF4-207ENST00000461195 FAM3AP98173 230 aa18.92■□□□□ 0.62
TRAF4-207ENST00000461195 LRRN1Q6UXK5 716 aa18.92■□□□□ 0.62
TRAF4-207ENST00000461195 MEPCEQ7L2J0 689 aaKnown RBP18.92■□□□□ 0.62
TRAF4-207ENST00000461195 C1orf87Q8N0U7 546 aa18.92■□□□□ 0.62
TRAF4-207ENST00000461195 MUC20Q8N307 709 aaPredicted RBP18.92■□□□□ 0.62
TRAF4-207ENST00000461195 TMEM163Q8TC26 289 aa18.92■□□□□ 0.62
TRAF4-207ENST00000461195 RBM4BQ9BQ04 359 aaKnown RBP18.92■□□□□ 0.62
TRAF4-207ENST00000461195 CYB5R3P00387 301 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-207ENST00000461195 IRF2P14316 349 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 SRP14P37108 136 aaKnown RBP18.91■□□□□ 0.62
TRAF4-207ENST00000461195 PMELP40967 661 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 AADACL4Q5VUY2 407 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 NXNL2Q5VZ03 156 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 KCTD18Q6PI47 426 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-207ENST00000461195 KRT77Q7Z794 578 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 KLBQ86Z14 1044 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 C10orf67Q8IYJ2 551 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 SPERTQ8NA61 448 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 IL4I1Q96RQ9 567 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 PKP2Q99959 881 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 GABARAPL3Q9BY60 117 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 RGCCQ9H4X1 137 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 PATZ1Q9HBE1 687 aaKnown RBP18.91■□□□□ 0.62
TRAF4-207ENST00000461195 G6PC2Q9NQR9 355 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 ZNF319Q9P2F9 582 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 LRP12Q9Y561 859 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 TMEM14AQ9Y6G1 99 aa18.91■□□□□ 0.62
TRAF4-207ENST00000461195 hCG_38984A0A1B0GV85 526 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 SLC22A31A6NKX4 558 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 ANKRD30BLA7E2S9 258 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 H3BNX3 289 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 THBS2P35442 1172 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 PSMA6P60900 246 aaKnown RBP18.9■□□□□ 0.62
TRAF4-207ENST00000461195 GFOD2Q3B7J2 385 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 PRAMEF6Q5VXH4 476 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 FAHD2BQ6P2I3 314 aaPredicted RBP18.9■□□□□ 0.62
TRAF4-207ENST00000461195 DEGS2Q6QHC5 323 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 BCDIN3DQ7Z5W3 292 aaKnown RBP18.9■□□□□ 0.62
TRAF4-207ENST00000461195 OR11L1Q8NGX0 322 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 Q8TCH9 128 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 FAHD2AQ96GK7 314 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 CNN2Q99439 309 aaKnown RBP18.9■□□□□ 0.62
TRAF4-207ENST00000461195 RIBC2Q9H4K1 309 aa18.9■□□□□ 0.62
TRAF4-207ENST00000461195 A0A0G2JMP0 313 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.89■□□□□ 0.61
TRAF4-207ENST00000461195 A0A0X1KG70 313 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 FOXH1O75593 365 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 PNPP00491 289 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 POLR2IP36954 125 aaKnown RBP18.89■□□□□ 0.61
TRAF4-207ENST00000461195 LCN2P80188 198 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 MZT1Q08AG7 82 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 GID4Q8IVV7 300 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 PLPP7Q8NBV4 271 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 OR4M2Q8NGB6 313 aa18.89■□□□□ 0.61
TRAF4-207ENST00000461195 ASB17Q8WXJ9 295 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms