RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 METTL11BQ5VVY1 283 aa14.28□□□□□ -0.12
TOP3A-202ENST00000461127 ZNF770Q6IQ21 691 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-202ENST00000461127 C1orf94Q6P1W5 598 aa14.28□□□□□ -0.12
TOP3A-202ENST00000461127 IZUMO2Q6UXV1 221 aa14.28□□□□□ -0.12
TOP3A-202ENST00000461127 DCDC5Q6ZRR9 648 aa14.28□□□□□ -0.12
TOP3A-202ENST00000461127 HAVCR1Q96D42 359 aa14.28□□□□□ -0.12
TOP3A-202ENST00000461127 MEGF10Q96KG7 1140 aa14.28□□□□□ -0.12
TOP3A-202ENST00000461127 DGCR6LQ9BY27 220 aa14.28□□□□□ -0.12
TOP3A-202ENST00000461127 MEPEQ9NQ76 525 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-202ENST00000461127 PAPOLBQ9NRJ5 636 aaKnown RBP14.28□□□□□ -0.12
TOP3A-202ENST00000461127 ZNF816-ZNF321PA0A0X1KG74 233 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 EFCAB9A8MZ26 197 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 C22orf46C9J442 243 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 TSPAN9O75954 239 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 IRF2P14316 349 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 FPR3P25089 353 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 OMPP47874 163 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 KDM4DQ6B0I6 523 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 OR10AD1Q8NGE0 317 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 OR13G1Q8NGZ3 307 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 SGCDQ92629 289 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 PTP4A1Q93096 173 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 TECTBQ96PL2 329 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 POFUT1Q9H488 388 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 C20orf141Q9NUB4 165 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 NECAP2Q9NVZ3 263 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 SMPD3Q9NY59 655 aaPredicted RBP14.27□□□□□ -0.13
TOP3A-202ENST00000461127 ENOPH1Q9UHY7 261 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 FAM96BQ9Y3D0 163 aa14.27□□□□□ -0.13
TOP3A-202ENST00000461127 UNC119BA6NIH7 251 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 C12orf71A8MTZ7 269 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 IGF2P01344 180 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 VSIG8P0DPA2 414 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 COX5BP10606 129 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 TGFBR2P37173 567 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 COX10Q12887 443 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 TSPAN31Q12999 210 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 HERPUD1Q15011 391 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 RFX4Q33E94 735 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 ARMC4Q5T2S8 1044 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 TMPRSS11FQ6ZWK6 438 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 SYT9Q86SS6 491 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 MOGAT3Q86VF5 341 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 OR5AS1Q8N127 324 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 PNLDC1Q8NA58 520 aaKnown RBP14.26□□□□□ -0.13
TOP3A-202ENST00000461127 FNDC8Q8TC99 324 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 HDAC2Q92769 488 aaKnown RBP14.26□□□□□ -0.13
TOP3A-202ENST00000461127 NMD3Q96D46 503 aaKnown RBP14.26□□□□□ -0.13
TOP3A-202ENST00000461127 WDFY2Q96P53 400 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 RBP7Q96R05 134 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 TBX15Q96SF7 602 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 NIPSNAP1Q9BPW8 284 aa14.26□□□□□ -0.13
TOP3A-202ENST00000461127 IGKV1D-43A0A0B4J1Z2 117 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 A0A0U1RQK1 487 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 H0YJX3 145 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 MITFO75030 526 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-202ENST00000461127 OR7A10O76100 309 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 MMP9P14780 707 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 RAC2P15153 192 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 HTR5AP47898 357 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 GSSP48637 474 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 HSPA13P48723 471 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 AQP4P55087 323 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 SLC25A47Q6Q0C1 308 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 LYPD2Q6UXB3 125 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 CD300LDQ6UXZ3 194 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 LHX4Q969G2 390 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 RDH12Q96NR8 316 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 ALG12Q9BV10 488 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 RIBC2Q9H4K1 309 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 ERVK-18Q9QC07 812 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 STARD10Q9Y365 291 aa14.25□□□□□ -0.13
TOP3A-202ENST00000461127 CAB39Q9Y376 341 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-202ENST00000461127 TENM3Q9P273 2699 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 A0A1W2PPL8 197 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 GPR37O15354 613 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 XPNPEP2O43895 674 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 FUT1P19526 365 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 MSR1P21757 451 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 AQP2P41181 271 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 SLC9A3P48764 834 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 ZIK1Q3SY52 487 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-202ENST00000461127 FAM201AQ5SY85 155 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 ZNF841Q6ZN19 808 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 OAFQ86UD1 273 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 OR8G5Q8NG78 346 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 ZNF582Q96NG8 517 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-202ENST00000461127 WACQ9BTA9 647 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 NDEL1Q9GZM8 345 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 VPREB3Q9UKI3 123 aa14.24□□□□□ -0.13
TOP3A-202ENST00000461127 IGHV3-64DA0A0J9YX35 117 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 ANKRD61A6NGH8 418 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 NPIPB13A6NJU9 1138 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 NPIPB4C9JG80 1138 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 H3BN98 237 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 DOK2O60496 412 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 OSMP13725 252 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 POU1F1P28069 291 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 PSMB10P40306 273 aa14.23□□□□□ -0.13
TOP3A-202ENST00000461127 SCRN3Q0VDG4 424 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms