RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TOR3AQ9H497 397 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 UFSP2Q9NUQ7 469 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 MRPL15Q9P015 296 aaKnown RBP15.85■□□□□ 0.13
COL5A1-203ENST00000460264 PRR23D1E9PI22 279 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-203ENST00000460264 XRCC2O43543 280 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 GMDSO60547 372 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 PTBP3O95758 552 aaKnown RBP15.84■□□□□ 0.13
COL5A1-203ENST00000460264 PRR23D2P0DMB1 279 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-203ENST00000460264 ANXA8P13928 327 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 ZNF12P17014 697 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 CPT2P23786 658 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 CDK5Q00535 292 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 ZNF154Q13106 437 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 USP43Q70EL4 1123 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 KLBQ86Z14 1044 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 OR56B2PQ8NGI1 322 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 OR11L1Q8NGX0 322 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 DVL3Q92997 716 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-203ENST00000460264 ZMYND19Q96E35 227 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-203ENST00000460264 SSBP3Q9BWW4 388 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-203ENST00000460264 OR5V1Q9UGF6 321 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 N6AMT1Q9Y5N5 214 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 INSIG2Q9Y5U4 225 aa15.84■□□□□ 0.13
COL5A1-203ENST00000460264 PRODHO43272 600 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 TBX1O43435 398 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 HMGN1P05114 100 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 IRF2P14316 349 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 HSD11B1P28845 292 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 OPRL1P41146 370 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 HILS1P60008 231 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 SHFQ7M4L6 423 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 PRSS45Q7RTY3 260 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-203ENST00000460264 ZFAND2BQ8WV99 257 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 SLC6A7Q99884 636 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 CADM1Q9BY67 442 aaKnown RBP15.83■□□□□ 0.12
COL5A1-203ENST00000460264 NTN4Q9HB63 628 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 MIOXQ9UGB7 285 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 PPIAL4AQ9Y536 164 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 ANK2Q01484 3957 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 TENM1Q9UKZ4 2725 aa15.83■□□□□ 0.12
COL5A1-203ENST00000460264 GSC2O15499 205 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 SELENOFO60613 162 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 APOC1P02654 83 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 ANXA2P07355 339 aaKnown RBP15.82■□□□□ 0.12
COL5A1-203ENST00000460264 ZNF121P58317 390 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-203ENST00000460264 PAX2Q02962 417 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 BNIP1Q12981 228 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 RHOUQ7L0Q8 258 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 SLC16A9Q7RTY1 509 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 CPOQ8IVL8 374 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 OTOSQ8NHW6 89 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 NEIL1Q96FI4 390 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-203ENST00000460264 FN3KRPQ9HA64 309 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 SLC25A19Q9HC21 320 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 AUP1Q9Y679 476 aa15.82■□□□□ 0.12
COL5A1-203ENST00000460264 TIPRLO75663 272 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 DDOSTP39656 456 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 GNB2P62879 340 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 FAM3AP98173 230 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 HOXA4Q00056 320 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-203ENST00000460264 TIGD6Q17RP2 521 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 KLHL12Q53G59 568 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 ARMCX4Q5H9R4 360 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 TMEM236Q5W0B7 351 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 DCDC5Q6ZRR9 648 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 FAM57BQ71RH2 274 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 NLRC3Q7RTR2 1065 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 BPIFB2Q8N4F0 458 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 PLPP7Q8NBV4 271 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 C19orf18Q8NEA5 215 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 BBS1Q8NFJ9 593 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 OR8B3Q8NGG8 313 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 OR52H1Q8NGJ2 320 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 DNAJC9Q8WXX5 260 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 UTP4Q969X6 686 aaKnown RBP15.81■□□□□ 0.12
COL5A1-203ENST00000460264 NRBF2Q96F24 287 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 REEP6Q96HR9 211 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 PLEKHA8Q96JA3 519 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 OR8B2Q96RD0 313 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 MRI1Q9BV20 369 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 SUCNR1Q9BXA5 334 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 SP140LQ9H930 580 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 DNAJC27Q9NZQ0 273 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 KIF17Q9P2E2 1029 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 RNF7Q9UBF6 113 aa15.81■□□□□ 0.12
COL5A1-203ENST00000460264 hCG_38984A0A1B0GV85 526 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 LYNP07948 512 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 H2BFMP0C1H6 154 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 SLC2A5P22732 501 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 NAA10P41227 235 aaPredicted RBP15.8■□□□□ 0.12
COL5A1-203ENST00000460264 PITPNBP48739 271 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 SLC35D3Q5M8T2 416 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 FAHD1Q6P587 224 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 ZNF454Q8N9F8 522 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 SPERTQ8NA61 448 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 DACT3Q96B18 629 aaPredicted RBP15.8■□□□□ 0.12
COL5A1-203ENST00000460264 SGK3Q96BR1 496 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 PAPOLBQ9NRJ5 636 aaKnown RBP15.8■□□□□ 0.12
COL5A1-203ENST00000460264 ZNF319Q9P2F9 582 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms