RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SLC25A28Q96A46 364 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 TRIM36Q9NQ86 728 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 XRCC2O43543 280 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 GYPBP06028 91 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 ZNF3P17036 446 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 EGR1P18146 543 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 MZT1Q08AG7 82 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 GK3PQ14409 553 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 TAF13Q15543 124 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 MICAQ29983 383 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 FAM98BQ52LJ0 330 aaKnown RBP18.97■□□□□ 0.63
PTPN4-207ENST00000460162 DHFR2Q86XF0 187 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 C19orf18Q8NEA5 215 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 OR56B2PQ8NGI1 322 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 OR6K6Q8NGW6 343 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 SPSB4Q96A44 273 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 ZNF747Q9BV97 191 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 MMADHCQ9H3L0 296 aaPredicted RBP18.97■□□□□ 0.63
PTPN4-207ENST00000460162 ARMC1Q9NVT9 282 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 VNN3Q9NY84 501 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 U3KQV3 271 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 MGAM2Q2M2H8 2515 aa18.97■□□□□ 0.63
PTPN4-207ENST00000460162 IGHV3OR16-10A0A075B7F0 116 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.96■□□□□ 0.63
PTPN4-207ENST00000460162 C5orf63A6NC05 138 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 RIIAD1A6NNX1 92 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 B2RBV5 119 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 LGALS8O00214 317 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 SLC15A1P46059 708 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 PRKXP51817 358 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 GRB2P62993 217 aaKnown RBP18.96■□□□□ 0.63
PTPN4-207ENST00000460162 PPP1R8Q12972 351 aaKnown RBP18.96■□□□□ 0.63
PTPN4-207ENST00000460162 TRIM25Q14258 630 aaKnown RBP18.96■□□□□ 0.63
PTPN4-207ENST00000460162 ZNF511Q8NB15 262 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 CENPMQ9NSP4 180 aa18.96■□□□□ 0.63
PTPN4-207ENST00000460162 C22orf46C9J442 243 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 ZNF593O00488 134 aaPredicted RBP18.95■□□□□ 0.62
PTPN4-207ENST00000460162 SLC2A1P11166 492 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 DDOSTP39656 456 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 SLC9A3R2Q15599 337 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 LINC01590Q5TEZ4 76 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 TECTBQ96PL2 329 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 TOR3AQ9H497 397 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 CMC2Q9NRP2 79 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 C14orf119Q9NWQ9 140 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 ERVK-18Q9QC07 812 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 CTSZQ9UBR2 303 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 PCDHGB1Q9Y5G3 927 aa18.95■□□□□ 0.62
PTPN4-207ENST00000460162 TRAV38-1A0A0B4J264 116 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 DHRS12A0PJE2 317 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 OOEPA6NGQ2 149 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 NDUFA2O43678 99 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 CLUP10909 449 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 BPIFB3P59826 476 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 FGF12P61328 243 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 OR8B8Q15620 311 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 CD276Q5ZPR3 534 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 SHISA2Q6UWI4 295 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 CD300LDQ6UXZ3 194 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 OR10G2Q8NGC3 310 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 TEX47Q8TBZ9 253 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 NSL1Q96IY1 281 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 C1orf123Q9NWV4 160 aa18.94■□□□□ 0.62
PTPN4-207ENST00000460162 PRPF19Q9UMS4 504 aaKnown RBP18.94■□□□□ 0.62
PTPN4-207ENST00000460162 A6NLC8 198 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 C3orf80F5H4A9 247 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 APOC1P02654 83 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 CALB2P22676 271 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 HSD11B1P28845 292 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 CX3CR1P49238 355 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 IL13RA1P78552 427 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 HOXA4Q00056 320 aaPredicted RBP18.93■□□□□ 0.62
PTPN4-207ENST00000460162 EIF2B1Q14232 305 aaKnown RBP18.93■□□□□ 0.62
PTPN4-207ENST00000460162 GPR157Q5UAW9 335 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 SFRP4Q6FHJ7 346 aaPredicted RBP18.93■□□□□ 0.62
PTPN4-207ENST00000460162 OR6N2Q8NGY6 317 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 ASB9Q96DX5 294 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 INTS14Q96SY0 518 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 SP140LQ9H930 580 aa18.93■□□□□ 0.62
PTPN4-207ENST00000460162 ARRDC5A6NEK1 342 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 ANKRD30BLA7E2S9 258 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 TBX1O43435 398 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 ADAM20O43506 726 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 LIPFP07098 398 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 RAP2AP10114 183 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 GRK5P34947 590 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 MS4A2Q01362 244 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 TIGD6Q17RP2 521 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 RHOUQ7L0Q8 258 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 SLC16A9Q7RTY1 509 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 GCSAMQ8N6F7 178 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 BOLLQ8N9W6 283 aaKnown RBP18.92■□□□□ 0.62
PTPN4-207ENST00000460162 OR8S1Q8NH09 359 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 RNF133Q8WVZ7 376 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 NIPSNAP1Q9BPW8 284 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 PRDM13Q9H4Q3 707 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 KIF17Q9P2E2 1029 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 N6AMT1Q9Y5N5 214 aa18.92■□□□□ 0.62
PTPN4-207ENST00000460162 hCG_1807616A0A1W2PRN6 198 aa18.91■□□□□ 0.62
PTPN4-207ENST00000460162 ANXA2P07355 339 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms