RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PRMT9Q6P2P2 845 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 TPGS1Q6ZTW0 290 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 BHLHA15Q7RTS1 189 aaPredicted RBP3.41□□□□□ -1.86
CCDC50-203ENST00000460064 NELFCDQ8IXH7 590 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 SELENOHQ8IZQ5 122 aaKnown RBP3.41□□□□□ -1.86
CCDC50-203ENST00000460064 FAM58AQ8N1B3 248 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 OR10G2Q8NGC3 310 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 LRRC20Q8TCA0 184 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 PIFOQ8TCI5 191 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 CA5BP1Q8WTZ4 195 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 ZNF317Q96PQ6 595 aaPredicted RBP3.41□□□□□ -1.86
CCDC50-203ENST00000460064 TIMM17AQ99595 171 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 C9orf16Q9BUW7 83 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 PRRG3Q9BZD7 231 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 SHCBP1LQ9BZQ2 653 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 OR2AG1Q9H205 316 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 OR52A5Q9H2C5 316 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 GAL3ST2Q9H3Q3 398 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 C12orf10Q9HB07 376 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 CLN6Q9NWW5 311 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 MTFP1Q9UDX5 166 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 IGKV2D-24A0A075B6R9 120 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 TRPC5OSA6NMA1 111 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 KDELR3O43731 214 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 CTDNEP1O95476 244 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 SSTR5P35346 364 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 PPP1R2P41236 205 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 CDKN2DP55273 166 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 ESRRGP62508 458 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 CHRFAM7AQ494W8 412 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 PPP1R2P3Q6NXS1 205 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 CBLN2Q8IUK8 224 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 CDKL3Q8IVW4 592 aaPredicted RBP3.4□□□□□ -1.87
CCDC50-203ENST00000460064 LRRC8AQ8IWT6 810 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 COX18Q8N8Q8 333 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 OR11H7Q8NGC8 314 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 UBA3Q8TBC4 463 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 CIDECQ96AQ7 238 aaPredicted RBP3.4□□□□□ -1.87
CCDC50-203ENST00000460064 DYNLL2Q96FJ2 89 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 C9orf72Q96LT7 481 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 POTEKPQ9BYX7 375 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 UPF3BQ9BZI7 483 aaKnown RBP3.4□□□□□ -1.87
CCDC50-203ENST00000460064 PATZ1Q9HBE1 687 aaKnown RBP3.4□□□□□ -1.87
CCDC50-203ENST00000460064 ZDHHC4Q9NPG8 344 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 ZC4H2Q9NQZ6 224 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 SLC39A1Q9NY26 324 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 DDX19BQ9UMR2 479 aa3.4□□□□□ -1.87
CCDC50-203ENST00000460064 RBMX2Q9Y388 322 aaKnown RBP3.4□□□□□ -1.87
CCDC50-203ENST00000460064 GOLGA8QA0A0J9YX86 632 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 H7C1H1 209 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 NME4O00746 187 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 CHMP2AO43633 222 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 RBBP9O75884 186 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 HPRT1P00492 218 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 DTYMKP23919 212 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 CRATP43155 626 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 SERPINB8P50452 374 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 CLDN18P56856 261 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF121P58317 390 aaPredicted RBP3.39□□□□□ -1.87
CCDC50-203ENST00000460064 PFN3P60673 137 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 VBP1P61758 197 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 SIGLEC14Q08ET2 396 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 PIGHQ14442 188 aaPredicted RBP3.39□□□□□ -1.87
CCDC50-203ENST00000460064 DMC1Q14565 340 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 USF2Q15853 346 aaPredicted RBP3.39□□□□□ -1.87
CCDC50-203ENST00000460064 FAM78AQ5JUQ0 283 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 SAPCD1Q5SSQ6 148 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 HHATQ5VTY9 493 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 APRG1Q8IVJ8 170 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 RIMKLAQ8IXN7 391 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 COQ8AQ8NI60 647 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 IL22Q9GZX6 179 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 HDHD2Q9H0R4 259 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 DDX19AQ9NUU7 478 aaKnown RBP3.39□□□□□ -1.87
CCDC50-203ENST00000460064 FKBP14Q9NWM8 211 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 YARS2Q9Y2Z4 477 aaKnown RBP3.39□□□□□ -1.87
CCDC50-203ENST00000460064 HYOU1Q9Y4L1 999 aa3.39□□□□□ -1.87
CCDC50-203ENST00000460064 FHOD3Q2V2M9 1422 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 GOLGA8IPA6NC78 632 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 A6NDN8 102 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 PDZK1P1A8MUH7 402 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 PLPP1O14494 284 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 SCN2BO60939 215 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 IGKV3-11P04433 115 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 CTSLP07711 333 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 NQO2P16083 231 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF32P17041 273 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 PSMC3P17980 439 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 RAB4AP20338 218 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 USF1P22415 310 aaPredicted RBP3.38□□□□□ -1.87
CCDC50-203ENST00000460064 RBM34P42696 430 aaKnown RBP3.38□□□□□ -1.87
CCDC50-203ENST00000460064 GPR1P46091 355 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 TNNC1P63316 161 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 TCEAL5Q5H9L2 206 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 NANOGP8Q6NSW7 305 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 HORMAD1Q86X24 394 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF547Q8IVP9 402 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 VKORC1L1Q8N0U8 176 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 LRRC75AQ8NAA5 344 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms