RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CHMP1AQ9HD42 196 aaPredicted RBP5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 TMEM9BQ9NQ34 198 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 SDHAF3Q9NRP4 125 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 ALKBH4Q9NXW9 302 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 NPIPA1Q9UND3 350 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 GTF2A1LQ9UNN4 478 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 GPR132Q9UNW8 380 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 SRPK3Q9UPE1 567 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 RPH3AQ9Y2J0 694 aaPredicted RBP5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 CARHSP1Q9Y2V2 147 aaKnown RBP5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 HRH3Q9Y5N1 445 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 POMT1Q9Y6A1 747 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 CFAP54Q96N23 3096 aa5.45□□□□□ -1.54
UBQLN4-202ENST00000459954 A0A1B0GX78 115 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 MEIS3P1A6NDR6 274 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 TMEM235A6NFC5 223 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 OR2W5A6NFC9 320 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 WIPF3A6NGB9 483 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 LIPT2A6NK58 231 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 VSTM2BA6NLU5 285 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 FIGNL2A6NMB9 653 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 POM121CA8CG34 1229 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 A8MUA0 341 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF878C9JN71 531 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 LGALS8O00214 317 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 TOX3O15405 576 aaPredicted RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SYT7O43581 403 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SIGLEC6O43699 453 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SFT2D2O95562 160 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 GPANK1O95872 356 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 APOC3P02656 99 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 HEXAP06865 529 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 PET100P0DJ07 73 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 VSIG8P0DPA2 414 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF28P17035 718 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 BCKDHBP21953 392 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ATP1B3P54709 279 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 GFERP55789 205 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 CLDN6P56747 220 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 DCDP81605 110 aaKnown RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 MC2RQ01718 297 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SPOCK1Q08629 439 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SRSF5Q13243 272 aaKnown RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 UNC119Q13432 240 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 NSDHLQ15738 373 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 MICBQ29980 383 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ODF4Q2M2E3 257 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 MOGAT2Q3SYC2 334 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SCGB2B2Q4G0G5 96 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 NKAPLQ5M9Q1 402 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ELP2Q6IA86 826 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 DHRS7BQ6IAN0 325 aaPredicted RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 C3orf33Q6P1S2 294 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 CORO6Q6QEF8 472 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 DBX2Q6ZNG2 339 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 CFAP77Q6ZQR2 320 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 LHFPL1Q86WI0 220 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 BAP18Q8IXM2 172 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 PRR22Q8IZ63 422 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SPAG16Q8N0X2 631 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 FAM89BQ8N5H3 189 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ARL6IP6Q8N6S5 226 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 KDF1Q8NAX2 398 aaPredicted RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 BPIFCQ8NFQ6 507 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 KNL1Q8NG31 2342 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 OR4K17Q8NGC6 315 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 OR56B1Q8NGI3 324 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 OR51A2Q8NGJ7 313 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 TSLPQ969D9 159 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ARL11Q969Q4 196 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 PPP1R14AQ96A00 147 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 FGGYQ96C11 551 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SLAMF6Q96DU3 332 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 LRRC46Q96FV0 321 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 MRGPRX4Q96LA9 322 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 TGM7Q96PF1 710 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 AQP10Q96PS8 301 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 GAL3ST4Q96RP7 486 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 NPAS1Q99742 590 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 KLHDC3Q9BQ90 382 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 URM1Q9BTM9 101 aaKnown RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF471Q9BX82 626 aaPredicted RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 SEC11CQ9BY50 192 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 PBOV1Q9GZY1 135 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 WDR13Q9H1Z4 485 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 CTSFQ9UBX1 484 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ZMAT5Q9UDW3 170 aaKnown RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 CGGBP1Q9UFW8 167 aaPredicted RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 FARSAQ9Y285 508 aaKnown RBP5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 PRELID3BQ9Y3B1 194 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF175Q9Y473 711 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 MYO15AQ9UKN7 3530 aa5.44□□□□□ -1.54
UBQLN4-202ENST00000459954 IGHV1OR21-1A0A087WYE8 117 aa5.43□□□□□ -1.54
UBQLN4-202ENST00000459954 OR2AT4A6NND4 320 aa5.43□□□□□ -1.54
UBQLN4-202ENST00000459954 F5H0A9 414 aaPredicted RBP5.43□□□□□ -1.54
UBQLN4-202ENST00000459954 H7C2Y5 167 aa5.43□□□□□ -1.54
UBQLN4-202ENST00000459954 P2RY10O00398 339 aa5.43□□□□□ -1.54
UBQLN4-202ENST00000459954 DUX1O43812 170 aa5.43□□□□□ -1.54
UBQLN4-202ENST00000459954 SSX5O60225 188 aa5.43□□□□□ -1.54
UBQLN4-202ENST00000459954 APOC1P02654 83 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms