RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 POC1BQ8TC44 478 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 M1APQ8TC57 530 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 NKD1Q969G9 470 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 SPTSSAQ969W0 71 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ADAT3Q96EY9 351 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-202ENST00000459727 WDR89Q96FK6 387 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-202ENST00000459727 POM121Q96HA1 1249 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 RASL10BQ96S79 203 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 GPER1Q99527 375 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 S100A13Q99584 98 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 SPSB2Q99619 263 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ARPC5LQ9BPX5 153 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 SF3B5Q9BWJ5 86 aaKnown RBP7.84□□□□□ -1.15
HDAC3-202ENST00000459727 REG4Q9BYZ8 158 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 OR10A2Q9H208 303 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 NELFAQ9H3P2 528 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 SEC61A2Q9H9S3 476 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ZC4H2Q9NQZ6 224 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 EDARQ9UNE0 448 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 VSIG4Q9Y279 399 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 PCDHGA1Q9Y5H4 931 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 FLVCR1Q9Y5Y0 555 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 LHFPL6Q9Y693 200 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 GOLGA4Q13439 2230 aaKnown RBP7.83□□□□□ -1.16
HDAC3-202ENST00000459727 THADAQ6YHU6 1953 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 TRBV6-7A0A0A0MS04 114 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 TRAV14DV4A0A0A6YYC5 116 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 IGHV3-20A0A0C4DH32 117 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 IGHV5-10-1A0A0J9YXX1 117 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 RAB19A4D1S5 217 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 FIGNL2A6NMB9 653 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 H3BSH0 61 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 ZNF354AO60765 605 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-202ENST00000459727 DHRS3O75911 302 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 OR2J2O76002 312 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 DKK1O94907 266 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 HPP00738 406 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 DCNP07585 359 aaKnown RBP7.83□□□□□ -1.16
HDAC3-202ENST00000459727 QDPRP09417 244 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 TPT1P13693 172 aaKnown RBP7.83□□□□□ -1.16
HDAC3-202ENST00000459727 BCKDHBP21953 392 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 VAMP1P23763 118 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 CPT2P23786 658 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PSMB6P28072 239 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 HRH1P35367 487 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 OR3A2P47893 321 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 P2RY4P51582 365 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 DSCR4P56555 118 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-202ENST00000459727 FOXK1P85037 733 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PPP1R1AQ13522 171 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 ZNF528Q3MIS6 628 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PAN3Q58A45 887 aaKnown RBP7.83□□□□□ -1.16
HDAC3-202ENST00000459727 MRPL14Q6P1L8 145 aaKnown RBP7.83□□□□□ -1.16
HDAC3-202ENST00000459727 CORO6Q6QEF8 472 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 GLIPR1L1Q6UWM5 242 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 ALKAL2Q6UX46 152 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 CFAP77Q6ZQR2 320 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 SHISA6Q6ZSJ9 500 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 MOB3CQ70IA8 216 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 UBALD2Q8IYN6 164 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 KDM8Q8N371 416 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 OR10G3Q8NGC4 313 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 OR8B12Q8NGG6 310 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 OR10S1Q8NGN2 331 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 OR1S1Q8NH92 325 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 LHFPL5Q8TAF8 219 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 OR51E1Q8TCB6 317 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PPP1R1CQ8WVI7 109 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 TMEM54Q969K7 222 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PMEPA1Q969W9 287 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PPP1R14AQ96A00 147 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 SPSB1Q96BD6 273 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 WBP1Q96G27 269 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PGAM5Q96HS1 289 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 TMEM41AQ96HV5 264 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 CCDC74BQ96LY2 380 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 TECTBQ96PL2 329 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 SELENOIQ9C0D9 397 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 CHST6Q9GZX3 395 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 ZNF700Q9H0M5 742 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 LPAR5Q9H1C0 372 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 KCNK15Q9H427 330 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 GAREM1Q9H706 876 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 TMEM185BQ9H7F4 350 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 GPR84Q9NQS5 396 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 PCDHB16Q9NRJ7 776 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 ASH2LQ9UBL3 628 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 KCNMB2Q9Y691 235 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 ADAMTS20P59510 1910 aa7.83□□□□□ -1.16
HDAC3-202ENST00000459727 USP34Q70CQ2 3546 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 ADAMTS9Q9P2N4 1935 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 IGKV1D-43A0A0B4J1Z2 117 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 RNF222A6NCQ9 220 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 DBX1A6NMT0 343 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 OR2AT4A6NND4 320 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 C17orf51A8MQB3 221 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 NPIPA2E9PIF3 369 aa7.82□□□□□ -1.16
HDAC3-202ENST00000459727 NPIPA3F8WFD2 350 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms