RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 EGR3Q06889 387 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 OR8G1Q15617 311 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 ZNF829Q3KNS6 432 aaPredicted RBP13.67□□□□□ -0.22
CD28-203ENST00000458610 C6orf52Q5T4I8 152 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 ZNF322Q6U7Q0 402 aaPredicted RBP13.67□□□□□ -0.22
CD28-203ENST00000458610 PRSS45Q7RTY3 260 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 C1orf87Q8N0U7 546 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 OR51G2Q8NGK0 314 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 OR2T27Q8NH04 317 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 CLDND2Q8NHS1 167 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 RAB39BQ96DA2 213 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 MEGF10Q96KG7 1140 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 Q96MT0 163 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 RDH12Q96NR8 316 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 MYCBPQ99417 103 aaPredicted RBP13.67□□□□□ -0.22
CD28-203ENST00000458610 ADGRL4Q9HBW9 690 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 C14orf119Q9NWQ9 140 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 TMEM160Q9NX00 188 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 KCNS2Q9ULS6 477 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 KLHDC2Q9Y2U9 406 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 LRP12Q9Y561 859 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 NPTNQ9Y639 398 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 MTORP42345 2549 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 CSPG4Q6UVK1 2322 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 TMEM269A0A1B0GVZ9 245 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 B4DSR2 109 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 LMX1BO60663 402 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 IRF2P14316 349 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 CA6P23280 308 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 CDH15P55291 814 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 CXCR4P61073 352 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 FAM3AP98173 230 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 OCLNQ16625 522 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 AVPI1Q5T686 147 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 PLPP7Q8NBV4 271 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 ZNF555Q8NEP9 628 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 OR10AD1Q8NGE0 317 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 OR56B2PQ8NGI1 322 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 OR11L1Q8NGX0 322 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 MSI2Q96DH6 328 aaKnown RBP13.66□□□□□ -0.22
CD28-203ENST00000458610 C1orf159Q96HA4 380 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 SLC29A1Q99808 456 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 GCM1Q9NP62 436 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 TREM2Q9NZC2 230 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 PCDHGB1Q9Y5G3 927 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 CACNG2Q9Y698 323 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 HIVEP2P31629 2446 aa13.66□□□□□ -0.22
CD28-203ENST00000458610 ISPDA4D126 451 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 INAFM1C9JVW0 142 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 F5H5P2 479 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 H0YL77 283 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 MLNRO43193 412 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 HLA-DPB1P04440 258 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 KRT8P05787 483 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 CPT2P23786 658 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 GNALP38405 381 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 CD200P41217 278 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 GATA4P43694 442 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 MMP16P51512 607 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 ZNF181Q2M3W8 571 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 GFOD2Q3B7J2 385 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 SPICQ8N5J4 248 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 PACRGLQ8N7B6 248 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 GAL3ST1Q99999 423 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 ADAT1Q9BUB4 502 aaKnown RBP13.65□□□□□ -0.22
CD28-203ENST00000458610 NARFLQ9H6Q4 476 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 ABCB9Q9NP78 766 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 SMPD3Q9NY59 655 aaPredicted RBP13.65□□□□□ -0.22
CD28-203ENST00000458610 LPAR3Q9UBY5 353 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 PCDHB10Q9UN67 800 aa13.65□□□□□ -0.22
CD28-203ENST00000458610 A0A0U1RQV5 110 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 LOC100130705A0A1B0GUX0 176 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 C5orf63A6NC05 138 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 CRLF1O75462 422 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 ATP6V1B1P15313 513 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 ZNF16P17020 682 aaPredicted RBP13.64□□□□□ -0.23
CD28-203ENST00000458610 MTNR1AP48039 350 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 GSK3AP49840 483 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 PRSS12P56730 875 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 ACTC1P68032 377 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 ACTA1P68133 377 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 SPRNQ5BIV9 151 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 PLEKHG7Q6ZR37 379 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 MUC20Q8N307 709 aaPredicted RBP13.64□□□□□ -0.23
CD28-203ENST00000458610 KLHL36Q8N4N3 616 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 OR8S1Q8NH09 359 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 MRPL48Q96GC5 212 aaKnown RBP13.64□□□□□ -0.23
CD28-203ENST00000458610 MBOAT4Q96T53 435 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 APOL4Q9BPW4 351 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 ZNF665Q9H7R5 613 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 MOB1AQ9H8S9 216 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 FN3KRPQ9HA64 309 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 FAM118AQ9NWS6 357 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 COPS3Q9UNS2 423 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 MPC1Q9Y5U8 109 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 CR1P17927 2039 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 ABCA1O95477 2261 aa13.64□□□□□ -0.23
CD28-203ENST00000458610 CHD3Q12873 2000 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms