RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LINC00346Q8IVM7 164 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 SFTPA2Q8IWL1 248 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 OR10H5Q8NGA6 315 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 OR9K2Q8NGE7 335 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 OR14C36Q8NHC7 312 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 PATE1Q8WXA2 126 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 TSACCQ96A04 125 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-208ENST00000456385 C14orf144Q96I85 54 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 RTN4RQ9BZR6 473 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 DNAJB11Q9UBS4 358 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 COA3Q9Y2R0 106 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-208ENST00000456385 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
CLIP4-208ENST00000456385 POMT1Q9Y6A1 747 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 ATG2BQ96BY7 2078 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 TMEM269A0A1B0GVZ9 245 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 SDCBPO00560 298 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-208ENST00000456385 KAT7O95251 611 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 ZNF708P17019 499 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 FCGR2CP31995 323 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 THBS4P35443 961 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 P2RY4P51582 365 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 RAB38P57729 211 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 KIAA0141Q14154 515 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-208ENST00000456385 HMGN3Q15651 99 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 FAM78AQ5JUQ0 283 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 NSUN5P2Q63ZY6 315 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 DTWD2Q8NBA8 298 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 OR52N5Q8NH56 324 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 OR1E3Q8WZA6 343 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 MALSU1Q96EH3 234 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 ADAT3Q96EY9 351 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-208ENST00000456385 BSCL2Q96G97 398 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-208ENST00000456385 OR2M4Q96R27 311 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 MESP1Q9BRJ9 268 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 FBXO7Q9Y3I1 522 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 R4GMQ9 66 aa9.17□□□□□ -0.94
CLIP4-208ENST00000456385 H7C1Q1 480 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 TAAR5O14804 337 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 SOCS1O15524 211 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 RAD51DO75771 328 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 KNG1P01042 644 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 GUSBP08236 651 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 HOXC4P09017 264 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 OR13C7P0DN81 318 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 HOXA5P20719 270 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ITGA3P26006 1051 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 GPR3P46089 330 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 RPS10P46783 165 aaKnown RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 SSTP61278 116 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 EIF5AP63241 154 aaKnown RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 FNDC7Q5VTL7 733 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 LCN10Q6JVE6 187 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 UNQ6494/PRO21346Q6UXR6 183 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 DCXRQ7Z4W1 244 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ANGPTL5Q86XS5 388 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 KDM8Q8N371 416 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ARRDC1Q8N5I2 433 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 NKAIN3Q8N8D7 197 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 MAFIPQ8WZ33 124 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ERGIC1Q969X5 290 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ASB16Q96NS5 453 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 PIGQQ9BRB3 760 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 FOXQ1Q9C009 403 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 OR10A5Q9H207 317 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 MMP24Q9Y5R2 645 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 A0A1W2PP11 408 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 CXorf65A6NEN9 183 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 K7EPK0 472 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ST8SIA5O15466 376 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 LINC00271P0C7V0 271 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 PET100P0DJ07 73 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 CSF2RAP15509 400 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 RPS2P15880 293 aaKnown RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 TBPP20226 339 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 EMP2P54851 167 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 NDUFA6P56556 154 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 RPS23P62266 143 aaKnown RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 CCINQ13939 588 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 Q3ZCU0 254 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ACTBL2Q562R1 376 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 DMRTC1Q5HYR2 192 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 AADACL3Q5VUY0 350 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ZNF574Q6ZN55 896 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 ZNF101Q8IZC7 436 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 FAM71E2Q8N5Q1 922 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 OR56B1Q8NGI3 324 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 OR13G1Q8NGZ3 307 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 BAHD1Q8TBE0 780 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 GTF3AQ92664 365 aaKnown RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 MEGF10Q96KG7 1140 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 GNRHR2Q96P88 292 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 CCDC3Q9BQI4 270 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 CHST5Q9GZS9 411 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 PRDM13Q9H4Q3 707 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 BANF2Q9H503 90 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 LMAN1LQ9HAT1 526 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 THAP10Q9P2Z0 257 aaPredicted RBP9.16□□□□□ -0.94
CLIP4-208ENST00000456385 CHD9Q3L8U1 2897 aa9.16□□□□□ -0.94
CLIP4-208ENST00000456385 JTBO76095 146 aa9.15□□□□□ -0.94
CLIP4-208ENST00000456385 IFNA17P01571 189 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms