RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DCTN5Q9BTE1 182 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 SLC22A4Q9H015 551 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 SERTAD4Q9NUC0 356 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 POLR1DQ9Y2S0 133 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 SNX13Q9Y5W8 968 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 A0A087WUU8 490 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 IGLV1-36A0A0B4J1U3 117 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 WI2-2373I1.2A0A1W2PRP0 233 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 F5H5K5 113 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 FBXO24O75426 580 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 LCATP04180 440 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 GRPP07492 148 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 SELLP14151 372 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 SDHAP31040 664 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 ZNF92Q03936 586 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 EMX1Q04741 257 aaPredicted RBP13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 HABP2Q14520 560 aaPredicted RBP13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 SNAI3Q3KNW1 292 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 CYBRD1Q53TN4 286 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 RABL3Q5HYI8 236 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 NANOGP8Q6NSW7 305 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 SLC18B1Q6NT16 456 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 TMPRSS11FQ6ZWK6 438 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 WDR86Q86TI4 376 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 NDUFA11Q86Y39 141 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 LINC00346Q8IVM7 164 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 CMTM4Q8IZR5 234 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 OFCC1Q8IZS5 231 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 ACOT11Q8WXI4 607 aaPredicted RBP13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 ZNF702PQ9H963 129 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 NRIP3Q9NQ35 241 aa13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 PRPF19Q9UMS4 504 aaKnown RBP13.98□□□□□ -0.17
UBE2D4-209ENST00000454428 ACOT8O14734 319 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 ANGPT2O15123 496 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 PTP4A3O75365 173 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 CDKN2AP42771 156 aaKnown RBP13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 KRTAP10-11P60412 298 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 ACSM1Q08AH1 577 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 TRAP1Q12931 704 aaKnown RBP13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 MALLQ13021 153 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 MRPL21Q7Z2W9 205 aaKnown RBP13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 OR4F17Q8NGA8 305 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 OR2AE1Q8NHA4 323 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 CLPTM1LQ96KA5 538 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 OR4F4Q96R69 305 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 CITED2Q99967 270 aaPredicted RBP13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 NKIRAS1Q9NYS0 192 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 NOP16Q9Y3C1 178 aaKnown RBP13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 LYSTQ99698 3801 aa13.97□□□□□ -0.17
UBE2D4-209ENST00000454428 hCG_1807616A0A1W2PRN6 198 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 A6NLC8 198 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 SOCS2O14508 198 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 MDH1P40925 334 aaKnown RBP13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 TGM4P49221 684 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 FXYD6P3P58550 94 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 MAGOHP61326 146 aaKnown RBP13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 MBOAT2Q6ZWT7 520 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 RNF113BQ8IZP6 322 aaKnown RBP13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 SLC26A10Q8NG04 563 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 PIFOQ8TCI5 191 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 SLC7A13Q8TCU3 470 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 GPX7Q96SL4 187 aaPredicted RBP13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 ATF6BQ99941 703 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 MEGF9Q9H1U4 602 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 MRPL15Q9P015 296 aaKnown RBP13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 AURKCQ9UQB9 309 aa13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 V9GYY5 206 aaPredicted RBP13.96□□□□□ -0.17
UBE2D4-209ENST00000454428 FXYD1O00168 92 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 MUC1P15941 1255 aaPredicted RBP13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 IKZF1Q13422 519 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 TRAM2Q15035 370 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 MICBQ29980 383 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 LRRC75BQ2VPJ9 315 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 GPR139Q6DWJ6 353 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 TSEN54Q7Z6J9 526 aaKnown RBP13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 Q8N2B8 174 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 LRRC29Q8WV35 223 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 TPD52L3Q96J77 140 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 PITX2Q99697 317 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 RABEP2Q9H5N1 569 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 SIGLEC7Q9Y286 467 aa13.95□□□□□ -0.18
UBE2D4-209ENST00000454428 TXNDC12O95881 172 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 KDELR2P33947 212 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 GGT2P36268 569 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 CENPAP49450 140 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 SELENOWP63302 87 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 ECH1Q13011 328 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 LRRC23Q53EV4 343 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 GLYATL3Q5SZD4 288 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 STUMQ69YW2 141 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 PGM2L1Q6PCE3 622 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 ZNF730Q6ZMV8 503 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 ADCK1Q86TW2 530 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 OR6V1Q8N148 313 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 PAPD5Q8NDF8 572 aaKnown RBP13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 TLCD1Q96CP7 247 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 MAP6Q96JE9 813 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 FNDC11Q9BVV2 318 aa13.94□□□□□ -0.18
UBE2D4-209ENST00000454428 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms