RNA–Protein interactions for RNA: ENST00000454349.6

TNRC6B-206, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNRC6B, Length 18,279 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-206ENST00000454349 PTPN18Q99952 460 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 RNF11Q9Y3C5 154 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 SHPRHQ149N8 1683 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 SMIM10L2AP0DMW4 78 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 SMIM10L2BP0DMW5 78 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 UCP3P55916 312 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 MEF2CQ06413 473 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 RNFT1Q5M7Z0 435 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 C9orf131Q5VYM1 1079 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 DPPA4Q7L190 304 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 SLC25A19Q9HC21 320 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 RREB1Q92766 1687 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 OPN1SWP03999 348 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 TIMP2P16035 220 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 GUCA2BQ16661 112 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 OR2B11Q5JQS5 317 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 RAET1LQ5VY80 246 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 CPEB2Q7Z5Q1 589 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 BATF2Q8N1L9 274 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 LYRM4Q9HD34 91 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 AMMECR1Q9Y4X0 333 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 VIPR2P41587 438 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 HYAL1Q12794 435 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 ALKBH1Q13686 389 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 WDR31Q8NA23 367 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 TIMD4Q96H15 378 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 C1QTNF3Q9BXJ4 246 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 PIRO00625 290 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 RBFOX2O43251 390 aaKnown RBP eCLIP4.83□□□□□ -1.644e-6■■■■□ 23.6
TNRC6B-206ENST00000454349 FOLR2P14207 255 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 SMN1Q16637 294 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 KLHDC8AQ8IYD2 350 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 KIAA1958Q8N8K9 716 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 BEND2Q8NDZ0 799 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 RGP1Q92546 391 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 JKAMPQ9P055 326 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 LAMTOR3Q9UHA4 124 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 ZNF443Q9Y2A4 671 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 LAMB4A4D0S4 1761 aa4.83□□□□□ -1.64
TNRC6B-206ENST00000454349 ATF1P18846 271 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ODF4Q2M2E3 257 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 HFEQ30201 348 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 OR5M10Q6IEU7 315 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 NPY6RQ99463 290 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 CYSLTR2Q9NS75 346 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ST3GAL6Q9Y274 331 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 MFAP5Q13361 173 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 LGALS14Q8TCE9 139 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ANKRD63C9JTQ0 380 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 SMAD9O15198 467 aaKnown RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 S1PR2O95136 353 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 RD3LP0DJH9 198 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 FCGR2CP31995 323 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 PELI1Q96FA3 418 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 OR2A5Q96R48 311 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 NAA60Q9H7X0 242 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 FLRT3Q9NZU0 649 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 LOC390937A0A1W2PQ73 354 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ZC3H12DA2A288 527 aaKnown RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 SH2D7A6NKC9 451 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 C11orf98E9PRG8 122 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 GPANK1O95872 356 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 CAPNS1P04632 268 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 BLVRBP30043 206 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 TMEM267Q0VDI3 215 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 OR10AG1Q8NH19 301 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ZCCHC10Q8TBK6 192 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 IRF7Q92985 503 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 PSENENQ9NZ42 101 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ATRXP46100 2492 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 OR7C1O76099 320 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 TRGC1P0CF51 173 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 SH3BP2P78314 561 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 CA13Q8N1Q1 262 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 RHBDD1Q8TEB9 315 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 NOX4Q9NPH5 578 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 SIRT3Q9NTG7 399 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 HOXB5P09067 269 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 PSRC1Q6PGN9 363 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 C17orf78Q8N4C9 275 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ADAT3Q96EY9 351 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 SORT1Q99523 831 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 FAM103A1Q9BTL3 118 aaKnown RBP4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 CMC2Q9NRP2 79 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 GPR25O00155 361 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 PLPP2O43688 288 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 C22orf39Q6P5X5 142 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 OR5M1Q8NGP8 315 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 COX11Q9Y6N1 276 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 ACOT8O14734 319 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 SLC25A4P12235 298 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 LEXMQ3ZCV2 418 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 DNM1P46Q6ZS02 220 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 TMED7Q9Y3B3 224 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 EMC9Q9Y3B6 208 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 TMED7-TICAM2A0A0A6YYA0 188 aa4.82□□□□□ -1.64
TNRC6B-206ENST00000454349 OR2W5A6NFC9 320 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms