RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 PPIAL4FP0DN26 164 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 EPHA2P29317 976 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 SRP14P37108 136 aaKnown RBP12.22□□□□□ -0.45
HSPG2-207ENST00000453796 NAA10P41227 235 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-207ENST00000453796 ZNF121P58317 390 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-207ENST00000453796 SEC61A1P61619 476 aaKnown RBP12.22□□□□□ -0.45
HSPG2-207ENST00000453796 FAM3AP98173 230 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 APOFQ13790 326 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 OR8G1Q15617 311 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 MPPED2Q15777 294 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 SNAPC1Q16533 368 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 SLX4IPQ5VYV7 408 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 FAHD2BQ6P2I3 314 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-207ENST00000453796 SLC16A9Q7RTY1 509 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 KLHL36Q8N4N3 616 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 OR56B2PQ8NGI1 322 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 ERGIC1Q969X5 290 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 SGK3Q96BR1 496 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 FAHD2AQ96GK7 314 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 TEAD3Q99594 435 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 ADAT1Q9BUB4 502 aaKnown RBP12.22□□□□□ -0.45
HSPG2-207ENST00000453796 TMEM165Q9HC07 324 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 KRT84Q9NSB2 600 aa12.22□□□□□ -0.45
HSPG2-207ENST00000453796 NOP16Q9Y3C1 178 aaKnown RBP12.22□□□□□ -0.45
HSPG2-207ENST00000453796 A0A0G2JMP0 313 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 A0A0X1KG70 313 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 CEACAM18A8MTB9 384 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 J3QLI3 93 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 FOXH1O75593 365 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 ANXA2P07355 339 aaKnown RBP12.21□□□□□ -0.45
HSPG2-207ENST00000453796 WNT2P09544 360 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 H2BFMP0C1H6 154 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 FCGR1AP12314 374 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 ALOX5APP20292 161 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 GATA3P23771 443 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 DDOSTP39656 456 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 LCN2P80188 198 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 FAM201AQ5SY85 155 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 DCAF12L2Q5VW00 463 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 PRAMEF6Q5VXH4 476 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 C12orf73Q69YU5 71 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 FAM57BQ71RH2 274 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 ZDHHC13Q8IUH4 622 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 PHC2Q8IXK0 858 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 MUC20Q8N307 709 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-207ENST00000453796 OR4M2Q8NGB6 313 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 OR52H1Q8NGJ2 320 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 SPATA3Q8NHX4 192 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 THEM6Q8WUY1 208 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 DVL3Q92997 716 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-207ENST00000453796 REEP6Q96HR9 211 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 TEX12Q9BXU0 123 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 SP140LQ9H930 580 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 DNAJC27Q9NZQ0 273 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 N6AMT1Q9Y5N5 214 aa12.21□□□□□ -0.45
HSPG2-207ENST00000453796 RNF212BA8MTL3 300 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 TRAPPC2LH3BP13 241 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 M0R129 80 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 TBX1O43435 398 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 FAM20BO75063 409 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 ZNF205O95201 554 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 HCCSP53701 268 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 RPS7P62081 194 aaKnown RBP12.2□□□□□ -0.46
HSPG2-207ENST00000453796 SRSF2Q01130 221 aaKnown RBP12.2□□□□□ -0.46
HSPG2-207ENST00000453796 TIGD6Q17RP2 521 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 KRTAP24-1Q3LI83 254 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 ZNF404Q494X3 552 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 LRRN1Q6UXK5 716 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 KLBQ86Z14 1044 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 C1orf87Q8N0U7 546 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 RFLNBQ8N5W9 214 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 PLPP7Q8NBV4 271 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 TMEM158Q8WZ71 300 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 CIB1Q99828 191 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 YIPF3Q9GZM5 350 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 OPN4Q9UHM6 478 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 LRP12Q9Y561 859 aa12.2□□□□□ -0.46
HSPG2-207ENST00000453796 LOC105371242A0A075B767 164 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 LRRC30A6NM36 301 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 PRR32B1ATL7 298 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 CIB2O75838 187 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 FSHBP01225 129 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 CPT2P23786 658 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 GSK3AP49840 483 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 PSMA6P60900 246 aaKnown RBP12.19□□□□□ -0.46
HSPG2-207ENST00000453796 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-207ENST00000453796 PAX2Q02962 417 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 OR8B8Q15620 311 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 AADACL4Q5VUY2 407 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 C1QL2Q7Z5L3 287 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 BCDIN3DQ7Z5W3 292 aaKnown RBP12.19□□□□□ -0.46
HSPG2-207ENST00000453796 SPERTQ8NA61 448 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 CENPNQ96H22 339 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-207ENST00000453796 LYZL4Q96KX0 146 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 PRRG3Q9BZD7 231 aa12.19□□□□□ -0.46
HSPG2-207ENST00000453796 OR10A2Q9H208 303 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms