RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SFTPCP11686 197 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 NR2C1P13056 603 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 HOXB1P14653 301 aaPredicted RBP14.01□□□□□ -0.17
SNX17-204ENST00000453453 SRMP19623 302 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 EDNRAP25101 427 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CFPP27918 469 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 SLC25A1P53007 311 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 TMEM69Q5SWH9 247 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 ABLIM2Q6H8Q1 611 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 DNM1P34Q6PK57 102 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CFAP77Q6ZQR2 320 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 SLC36A1Q7Z2H8 476 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CLRN3Q8NCR9 226 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 OR13C5Q8NGS8 318 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 ROBO4Q8WZ75 1007 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 THRSPQ92748 146 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 FBXW5Q969U6 566 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 ZNF416Q9BWM5 594 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 PRDM14Q9GZV8 571 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 PCDHB16Q9NRJ7 776 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CA10Q9NS85 328 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 CLEC4AQ9UMR7 237 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 KCNK7Q9Y2U2 307 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 ZNF281Q9Y2X9 895 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 ZNF175Q9Y473 711 aa14.01□□□□□ -0.17
SNX17-204ENST00000453453 TRBV2A0A0J9YWF9 115 aa14□□□□□ -0.17
SNX17-204ENST00000453453 OR6C68A6NDL8 312 aa14□□□□□ -0.17
SNX17-204ENST00000453453 F5H5P2 479 aa14□□□□□ -0.17
SNX17-204ENST00000453453 H7C1C5 153 aa14□□□□□ -0.17
SNX17-204ENST00000453453 CYTIPO60759 359 aa14□□□□□ -0.17
SNX17-204ENST00000453453 IGHG1P01857 330 aa14□□□□□ -0.17
SNX17-204ENST00000453453 MELTFP08582 738 aa14□□□□□ -0.17
SNX17-204ENST00000453453 FCGR2AP12318 317 aa14□□□□□ -0.17
SNX17-204ENST00000453453 KLK2P20151 261 aa14□□□□□ -0.17
SNX17-204ENST00000453453 ART1P52961 327 aa14□□□□□ -0.17
SNX17-204ENST00000453453 CLDN17P56750 224 aa14□□□□□ -0.17
SNX17-204ENST00000453453 CLRN1P58418 232 aa14□□□□□ -0.17
SNX17-204ENST00000453453 LCN6P62502 163 aa14□□□□□ -0.17
SNX17-204ENST00000453453 RASGEF1BQ0VAM2 473 aa14□□□□□ -0.17
SNX17-204ENST00000453453 SLC17A1Q14916 467 aa14□□□□□ -0.17
SNX17-204ENST00000453453 PON3Q15166 354 aa14□□□□□ -0.17
SNX17-204ENST00000453453 C3AR1Q16581 482 aa14□□□□□ -0.17
SNX17-204ENST00000453453 TP53I3Q53FA7 332 aa14□□□□□ -0.17
SNX17-204ENST00000453453 KRTCAP3Q53RY4 240 aa14□□□□□ -0.17
SNX17-204ENST00000453453 TMEM255AQ5JRV8 349 aa14□□□□□ -0.17
SNX17-204ENST00000453453 RPTNQ6XPR3 784 aa14□□□□□ -0.17
SNX17-204ENST00000453453 KRT77Q7Z794 578 aa14□□□□□ -0.17
SNX17-204ENST00000453453 MCEMP1Q8IX19 187 aa14□□□□□ -0.17
SNX17-204ENST00000453453 OR6X1Q8NH79 312 aa14□□□□□ -0.17
SNX17-204ENST00000453453 OR1S1Q8NH92 325 aa14□□□□□ -0.17
SNX17-204ENST00000453453 ALG12Q9BV10 488 aa14□□□□□ -0.17
SNX17-204ENST00000453453 NMNAT2Q9BZQ4 307 aa14□□□□□ -0.17
SNX17-204ENST00000453453 ALX4Q9H161 411 aaPredicted RBP14□□□□□ -0.17
SNX17-204ENST00000453453 BEX1Q9HBH7 125 aa14□□□□□ -0.17
SNX17-204ENST00000453453 VSX1Q9NZR4 365 aaPredicted RBP14□□□□□ -0.17
SNX17-204ENST00000453453 DMXL2Q8TDJ6 3036 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 A0A0B4J203 849 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 SELENOFO60613 162 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 ZNF432O94892 652 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 CSF1P09603 554 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 PRKACAP17612 351 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 SPI1P17947 270 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 CRABP1P29762 137 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 AGTR1P30556 359 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 SSX6Q7RTT6 188 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 TMEM17Q86X19 198 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 CCDC36Q8IYA8 594 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 LINC00518Q8N0U6 118 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 OR2AK2Q8NG84 335 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 COQ8AQ8NI60 647 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 SNX33Q8WV41 574 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 SLC25A44Q96H78 314 aaPredicted RBP13.99□□□□□ -0.17
SNX17-204ENST00000453453 OR14A2Q96R54 314 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 SYT4Q9H2B2 425 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 MYOZ1Q9NP98 299 aaPredicted RBP13.99□□□□□ -0.17
SNX17-204ENST00000453453 NOX4Q9NPH5 578 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 MOKQ9UQ07 419 aa13.99□□□□□ -0.17
SNX17-204ENST00000453453 A0A1B0GTH9 108 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 GYPBP06028 91 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 CENPAP49450 140 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 TAS2R20P59543 309 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 RNPS1Q15287 305 aaKnown RBP13.98□□□□□ -0.17
SNX17-204ENST00000453453 P4HA3Q7Z4N8 544 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 ZNF454Q8N9F8 522 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 EXD3Q8N9H8 876 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 NOXO1Q8NFA2 376 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 OR6K6Q8NGW6 343 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 OR6N1Q8NGY5 312 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 SYNPRQ8TBG9 265 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 ZPLD1Q8TCW7 415 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 RNF128Q8TEB7 428 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 DERL3Q96Q80 235 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 KCNK17Q96T54 332 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 GFI1Q99684 422 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 EMC6Q9BV81 110 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 ARL6Q9H0F7 186 aa13.98□□□□□ -0.17
SNX17-204ENST00000453453 SRA1Q9HD15 236 aaKnown RBP13.98□□□□□ -0.17
SNX17-204ENST00000453453 A0A0D9SG52 128 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 SLC22A20A6NK97 555 aa13.97□□□□□ -0.17
SNX17-204ENST00000453453 ANXA2P2A6NMY6 339 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms