RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 FAM20BO75063 409 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 CLIC3O95833 236 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 NGFP01138 241 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 CD8AP01732 235 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 GNAO1P09471 354 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 CCDC159P0C7I6 412 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 ATP6V1B1P15313 513 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF121P58317 390 aaPredicted RBP7.46□□□□□ -1.22
COL28A1-205ENST00000453441 TIGD6Q17RP2 521 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 NKPD1Q17RQ9 610 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 CDONQ4KMG0 1287 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 PRSS57Q6UWY2 283 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 PGAP1Q75T13 922 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 SPATC1Q76KD6 591 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 PRSS45Q7RTY3 260 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 MRPL21Q7Z2W9 205 aaKnown RBP7.46□□□□□ -1.22
COL28A1-205ENST00000453441 FTMTQ8N4E7 242 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 OR52I1Q8NGK6 324 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 CNIH3Q8TBE1 160 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 NEU4Q8WWR8 484 aaPredicted RBP7.46□□□□□ -1.22
COL28A1-205ENST00000453441 SPSB4Q96A44 273 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 TMEM80Q96HE8 168 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 PGAM5Q96HS1 289 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 MRPL37Q9BZE1 423 aaKnown RBP7.46□□□□□ -1.22
COL28A1-205ENST00000453441 OR51B6Q9H340 312 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 NKIRAS2Q9NYR9 191 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 NUFIP1Q9UHK0 495 aaKnown RBP7.46□□□□□ -1.22
COL28A1-205ENST00000453441 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 ZDHHC8Q9ULC8 765 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 DIMT1Q9UNQ2 313 aaKnown RBP7.46□□□□□ -1.22
COL28A1-205ENST00000453441 COPS3Q9UNS2 423 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 PLEKHA6Q9Y2H5 1048 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 STARD10Q9Y365 291 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 EXOSC1Q9Y3B2 195 aaKnown RBP7.46□□□□□ -1.22
COL28A1-205ENST00000453441 SNX5Q9Y5X3 404 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 R4GMQ9 66 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 USF3Q68DE3 2245 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 TMEM129A0AVI4 362 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 IQCF6A8MYZ5 107 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 LOC110117498-PIK3R3F6TDL0 507 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 DENRO43583 198 aaKnown RBP7.45□□□□□ -1.22
COL28A1-205ENST00000453441 TIMM8AO60220 97 aaPredicted RBP7.45□□□□□ -1.22
COL28A1-205ENST00000453441 MTRF1O75570 445 aaKnown RBP7.45□□□□□ -1.22
COL28A1-205ENST00000453441 ADH4P08319 380 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 CSF3P09919 207 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF12P17014 697 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 PTH2RP49190 550 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 HCCSP53701 268 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 DSCR9P59020 149 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF85Q03923 595 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 MZT1Q08AG7 82 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 GALEQ14376 348 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 GK2Q14410 553 aaPredicted RBP7.45□□□□□ -1.22
COL28A1-205ENST00000453441 SMN1Q16637 294 aaKnown RBP7.45□□□□□ -1.22
COL28A1-205ENST00000453441 MST1LQ2TV78 715 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 C6orf141Q5SZD1 244 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF684Q5T5D7 378 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 BCL2L15Q5TBC7 163 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 RNLSQ5VYX0 342 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 SHEQ5VZ18 495 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 TMPRSS11AQ6ZMR5 421 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 KLBQ86Z14 1044 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 YIPF7Q8N8F6 280 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 CSNK2A3Q8NEV1 391 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 MYDGFQ969H8 173 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 CMBLQ96DG6 245 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 TBX5Q99593 518 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 SYT3Q9BQG1 590 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 ALG8Q9BVK2 526 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 CACNG6Q9BXT2 260 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 AMBNQ9NP70 447 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 ABCB9Q9NP78 766 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 FAM206AQ9NX38 181 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 ERVK13-1Q9NX77 482 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 PTTG3PQ9NZH4 202 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 TAAR3PQ9P1P4 343 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 MRM2Q9UI43 246 aaKnown RBP7.45□□□□□ -1.22
COL28A1-205ENST00000453441 PSORS1C1Q9UIG5 152 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 PURGQ9UJV8 347 aaKnown RBP7.45□□□□□ -1.22
COL28A1-205ENST00000453441 TPRKBQ9Y3C4 175 aa7.45□□□□□ -1.22
COL28A1-205ENST00000453441 LOC390937A0A1W2PQ73 354 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 DHRS7CA6NNS2 312 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 SLC1A7O00341 560 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 TBX1O43435 398 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 SRSF10O75494 262 aaKnown RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 UBCP0CG48 685 aaKnown RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 TNFSF4P23510 183 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 MMP15P51511 669 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 CCR9P51686 369 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 EFNA4P52798 201 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 ERVS71-1P61550 626 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 MRPS11P82912 194 aaKnown RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 PSG7Q13046 419 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 SNAI3Q3KNW1 292 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 CCDC58Q4VC31 144 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 RBM48Q5RL73 367 aaKnown RBP7.44□□□□□ -1.22
COL28A1-205ENST00000453441 GLYATL3Q5SZD4 288 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 SPATA46Q5T0L3 261 aa7.44□□□□□ -1.22
COL28A1-205ENST00000453441 ZBTB37Q5TC79 503 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms