RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 MPZL2O60487 215 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 CDC14BO60729 498 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 LILRA1O75019 489 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 GABRB1P18505 474 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 PSMA6P60900 246 aaKnown RBP16.91■□□□□ 0.3
COL9A3-202ENST00000452372 CXCR4P61073 352 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 BHLHE23Q8NDY6 225 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF555Q8NEP9 628 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 RHOXF1Q8NHV9 184 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 SPRYD4Q8WW59 207 aaPredicted RBP16.91■□□□□ 0.3
COL9A3-202ENST00000452372 PGAM5Q96HS1 289 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 OR10A2Q9H208 303 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 BRD7Q9NPI1 651 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF275Q9NSD4 429 aaPredicted RBP16.91■□□□□ 0.3
COL9A3-202ENST00000452372 TMEM100Q9NV29 134 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 IL19Q9UHD0 177 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 GGT3PA6NGU5 568 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 ACOD1A6NK06 481 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 SNTNA6NMZ2 147 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 CD300LBA8K4G0 201 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 PSMD9O00233 223 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 OR2T7P0C7T2 308 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 ATP6V1E1P36543 226 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 MTNR1AP48039 350 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 EGR3Q06889 387 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 TIGD6Q17RP2 521 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 SPRNQ5BIV9 151 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 OGFRL1Q5TC84 451 aaPredicted RBP16.9■□□□□ 0.3
COL9A3-202ENST00000452372 ENTHD1Q8IYW4 607 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 RFLNBQ8N5W9 214 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 OR2T27Q8NH04 317 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 REEP6Q96HR9 211 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 RGCCQ9H4X1 137 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 IKZF2Q9UKS7 526 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 FBN3Q75N90 2809 aa16.9■□□□□ 0.3
COL9A3-202ENST00000452372 IGHV4-61A0A0C4DH41 118 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 MLNRO43193 412 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 TACSTD2P09758 323 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 TNFRSF1AP19438 455 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 CFL1P23528 166 aaKnown RBP16.89■□□□□ 0.29
COL9A3-202ENST00000452372 DDOSTP39656 456 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 RIDAP52758 137 aaKnown RBP16.89■□□□□ 0.29
COL9A3-202ENST00000452372 FAM3AP98173 230 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 HFEQ30201 348 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 Q96MT0 163 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 TTTY10Q9BZA0 68 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 SLC22A4Q9H015 551 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 YAE1D1Q9NRH1 226 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 AASSQ9UDR5 926 aa16.89■□□□□ 0.29
COL9A3-202ENST00000452372 TMEM269A0A1B0GVZ9 245 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 H0YL77 283 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 APOL3O95236 402 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 GPR6P46095 362 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-202ENST00000452372 OR10H4Q8NGA5 316 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 RNFT2Q96EX2 444 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 OR2V2Q96R30 315 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 TBX5Q99593 518 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 APOL4Q9BPW4 351 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 FAM206AQ9NX38 181 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 MRPL15Q9P015 296 aaKnown RBP16.88■□□□□ 0.29
COL9A3-202ENST00000452372 NKX1-2Q9UD57 310 aaPredicted RBP16.88■□□□□ 0.29
COL9A3-202ENST00000452372 CACNG2Q9Y698 323 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 DYSFO75923 2080 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 TANC2Q9HCD6 1990 aa16.88■□□□□ 0.29
COL9A3-202ENST00000452372 A0A1W2PQL4 384 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-202ENST00000452372 MAGEB4O15481 346 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-202ENST00000452372 PPIHO43447 177 aaKnown RBP16.87■□□□□ 0.29
COL9A3-202ENST00000452372 HLA-DPB1P04440 258 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 MMP16P51512 607 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 SLC34A1Q06495 639 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 TMEM249Q2WGJ8 235 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 ZNF829Q3KNS6 432 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-202ENST00000452372 TTC23Q5W5X9 447 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 OR10AD1Q8NGE0 317 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 OR8B12Q8NGG6 310 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 OR56B2PQ8NGI1 322 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 ITLN1Q8WWA0 313 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 CCL17Q92583 94 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 MRM2Q9UI43 246 aaKnown RBP16.87■□□□□ 0.29
COL9A3-202ENST00000452372 ZNF391Q9UJN7 358 aa16.87■□□□□ 0.29
COL9A3-202ENST00000452372 hCG_38984A0A1B0GV85 526 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 F5H5P2 479 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 J3QRE1 110 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 GMDSO60547 372 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 CA6P23280 308 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 SRP9P49458 86 aaKnown RBP16.86■□□□□ 0.29
COL9A3-202ENST00000452372 GSK3AP49840 483 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 ADARB1P78563 741 aaKnown RBP16.86■□□□□ 0.29
COL9A3-202ENST00000452372 GFOD2Q3B7J2 385 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 ZNF684Q5T5D7 378 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 SSX6Q7RTT6 188 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 DHRSXQ8N5I4 330 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 SPATA3Q8NHX4 192 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 MEGF10Q96KG7 1140 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 TREM2Q9NZC2 230 aa16.86■□□□□ 0.29
COL9A3-202ENST00000452372 EXOGQ9Y2C4 368 aaKnown RBP16.86■□□□□ 0.29
COL9A3-202ENST00000452372 NOP16Q9Y3C1 178 aaKnown RBP16.86■□□□□ 0.29
COL9A3-202ENST00000452372 A0A0U1RQV5 110 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 CLDN25C9JDP6 229 aa16.85■□□□□ 0.29
COL9A3-202ENST00000452372 SRSF10O75494 262 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms