RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 HS3ST5Q8IZT8 346 aa16.23■□□□□ 0.19
USP40-207ENST00000450940 DACT3Q96B18 629 aaPredicted RBP16.23■□□□□ 0.19
USP40-207ENST00000450940 ABHD6Q9BV23 337 aa16.23■□□□□ 0.19
USP40-207ENST00000450940 PPIAL4AQ9Y536 164 aa16.23■□□□□ 0.19
USP40-207ENST00000450940 TENM1Q9UKZ4 2725 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 GGT3PA6NGU5 568 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 FAM20BO75063 409 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 ZNF205O95201 554 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 APOC1P02654 83 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 HMGN1P05114 100 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 SLC2A1P11166 492 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 PRKACGP22612 351 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 DDOSTP39656 456 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 CBX1P83916 185 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 PAX8Q06710 450 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 FAM201AQ5SY85 155 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 SPATA24Q86W54 205 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 ERI1Q8IV48 349 aaKnown RBP16.22■□□□□ 0.19
USP40-207ENST00000450940 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.22■□□□□ 0.19
USP40-207ENST00000450940 SPERTQ8NA61 448 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 OR11L1Q8NGX0 322 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 OR6N2Q8NGY6 317 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 NRBF2Q96F24 287 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 NEIL1Q96FI4 390 aaPredicted RBP16.22■□□□□ 0.19
USP40-207ENST00000450940 SSBP3Q9BWW4 388 aaPredicted RBP16.22■□□□□ 0.19
USP40-207ENST00000450940 SUCNR1Q9BXA5 334 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 SP140LQ9H930 580 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 ZNF556Q9HAH1 456 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 NTN4Q9HB63 628 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 AUP1Q9Y679 476 aa16.22■□□□□ 0.19
USP40-207ENST00000450940 PRR23D1E9PI22 279 aaPredicted RBP16.21■□□□□ 0.19
USP40-207ENST00000450940 GSC2O15499 205 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 PRODHO43272 600 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 E2F6O75461 281 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 PRR23D2P0DMB1 279 aaPredicted RBP16.21■□□□□ 0.19
USP40-207ENST00000450940 PPIAL4GP0DN37 164 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 IRF2P14316 349 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 RPS2P15880 293 aaKnown RBP16.21■□□□□ 0.19
USP40-207ENST00000450940 POU1F1P28069 291 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 OPRL1P41146 370 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 CX3CR1P49238 355 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 PRAMEF6Q5VXH4 476 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 DCDC5Q6ZRR9 648 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 SGK3Q96BR1 496 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 JMJD8Q96S16 334 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 AMELYQ99218 206 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 ADAT1Q9BUB4 502 aaKnown RBP16.21■□□□□ 0.19
USP40-207ENST00000450940 SLC25A19Q9HC21 320 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 OR5V1Q9UGF6 321 aa16.21■□□□□ 0.19
USP40-207ENST00000450940 CD80P33681 288 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 FAM3AP98173 230 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 BNIP1Q12981 228 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 PLBD1Q6P4A8 553 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 SPATC1Q76KD6 591 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 SLC16A9Q7RTY1 509 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 ZNF454Q8N9F8 522 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 OR56B2PQ8NGI1 322 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 OR52H1Q8NGJ2 320 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 OTOSQ8NHW6 89 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 FAM216AQ8WUB2 273 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 OTULINQ96BN8 352 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 PLEKHA8Q96JA3 519 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 SLC6A7Q99884 636 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 CADM1Q9BY67 442 aaKnown RBP16.2■□□□□ 0.18
USP40-207ENST00000450940 OR51V1Q9H2C8 321 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 FN3KRPQ9HA64 309 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 UFSP2Q9NUQ7 469 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 RNF7Q9UBF6 113 aa16.2■□□□□ 0.18
USP40-207ENST00000450940 TNFRSF13BO14836 293 aaPredicted RBP16.19■□□□□ 0.18
USP40-207ENST00000450940 SLC2A5P22732 501 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 FPR2P25090 351 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 HSD11B1P28845 292 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 PSMB10P40306 273 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 GNB2P62879 340 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 KLF17Q5JT82 389 aaPredicted RBP16.19■□□□□ 0.18
USP40-207ENST00000450940 SLC35D3Q5M8T2 416 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 ZNF841Q6ZN19 808 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 NLRC3Q7RTR2 1065 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 CPOQ8IVL8 374 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 RAB40AQ8WXH6 277 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 DNAJC9Q8WXX5 260 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 UTP4Q969X6 686 aaKnown RBP16.19■□□□□ 0.18
USP40-207ENST00000450940 ZMYND19Q96E35 227 aaPredicted RBP16.19■□□□□ 0.18
USP40-207ENST00000450940 MRI1Q9BV20 369 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 ZNF319Q9P2F9 582 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 NUP50Q9UKX7 468 aa16.19■□□□□ 0.18
USP40-207ENST00000450940 KIR2DS1A0A191URI9 304 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 TRIM77I1YAP6 450 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 RGS9O75916 674 aaPredicted RBP16.18■□□□□ 0.18
USP40-207ENST00000450940 CFL1P23528 166 aaKnown RBP16.18■□□□□ 0.18
USP40-207ENST00000450940 PITPNBP48739 271 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 ZNF121P58317 390 aaPredicted RBP16.18■□□□□ 0.18
USP40-207ENST00000450940 MZT1Q08AG7 82 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 FAHD1Q6P587 224 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 LYPD2Q6UXB3 125 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 LRRN1Q6UXK5 716 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 BPIFB2Q8N4F0 458 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 OR8B3Q8NGG8 313 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 REEP6Q96HR9 211 aa16.18■□□□□ 0.18
USP40-207ENST00000450940 OR8B2Q96RD0 313 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms