RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 H3BNX3 289 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 TNFRSF13BO14836 293 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 XRCC2O43543 280 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 CYB5R3P00387 301 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 APOC1P02654 83 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 LYNP07948 512 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 PPIAL4FP0DN26 164 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 POLR2IP36954 125 aaKnown RBP11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 DDOSTP39656 456 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 MDH2P40926 338 aaKnown RBP11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 CX3CR1P49238 355 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 ZNF121P58317 390 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 ACTR3P61158 418 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 APOFQ13790 326 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 FAHD2BQ6P2I3 314 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 SLC16A9Q7RTY1 509 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 BCDIN3DQ7Z5W3 292 aaKnown RBP11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 PLPP7Q8NBV4 271 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 OR56B2PQ8NGI1 322 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 THEM6Q8WUY1 208 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 FAHD2AQ96GK7 314 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 YIPF3Q9GZM5 350 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 N6AMT1Q9Y5N5 214 aa11.8□□□□□ -0.52
RTFDC1-204ENST00000449062 hCG_38984A0A1B0GV85 526 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 ISPDA4D126 451 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 GGT3PA6NGU5 568 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 E9PQ18 207 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 TRAPPC2LH3BP13 241 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 PHF1O43189 567 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 ZNF205O95201 554 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 FCGR1AP12314 374 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 CPT2P23786 658 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 NAA10P41227 235 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 SEC61A1P61619 476 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 PAX2Q02962 417 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 ROM1Q03395 351 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 FAM201AQ5SY85 155 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 FAM57BQ71RH2 274 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 MEPCEQ7L2J0 689 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 KRT74Q7RTS7 529 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 KLBQ86Z14 1044 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 C11orf53Q8IXP5 236 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 SPICQ8N5J4 248 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 OR52H1Q8NGJ2 320 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 PLEKHA8Q96JA3 519 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 CIB1Q99828 191 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 OSBPL10Q9BXB5 764 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 TEX12Q9BXU0 123 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 SEMA6AQ9H2E6 1030 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 OPA3Q9H6K4 179 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 PPP1R3EQ9H7J1 279 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 SP140LQ9H930 580 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 MMP26Q9NRE1 261 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 KRT84Q9NSB2 600 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 UBAP1Q9NZ09 502 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 TENM1Q9UKZ4 2725 aa11.79□□□□□ -0.52
RTFDC1-204ENST00000449062 CEACAM18A8MTB9 384 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 A8MXK9 166 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 J3QLI3 93 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 M0R129 80 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 FAM20BO75063 409 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 PNPP00491 289 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 FSHBP01225 129 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 ANXA2P07355 339 aaKnown RBP11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 H2BFMP0C1H6 154 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 GSK3AP49840 483 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 LCN2P80188 198 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 HOXA4Q00056 320 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 OR8G1Q15617 311 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 PRAMEF6Q5VXH4 476 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 DEGS2Q6QHC5 323 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 LRRN1Q6UXK5 716 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 ZNF771Q7L3S4 317 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 KLHL36Q8N4N3 616 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 TCEANCQ8N8B7 351 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 SPERTQ8NA61 448 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 TMEM163Q8TC26 289 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 DACT3Q96B18 629 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 REEP6Q96HR9 211 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 LYZL4Q96KX0 146 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 TMEM246Q9BRR3 403 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 NIPAL2Q9H841 368 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 HAO2Q9NYQ3 351 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 DNAJC27Q9NZQ0 273 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 KIF17Q9P2E2 1029 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 OAZ3Q9UMX2 235 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 COPS3Q9UNS2 423 aa11.78□□□□□ -0.52
RTFDC1-204ENST00000449062 FOXH1O75593 365 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 CIB2O75838 187 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 LHBP01229 141 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 GATA3P23771 443 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 ACKR3P25106 362 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 HSD11B1P28845 292 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 DCTDP32321 178 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 KPNB1Q14974 876 aaKnown RBP11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 OR8B8Q15620 311 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 TUSC1Q2TAM9 212 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF404Q494X3 552 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms