RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 MMP9P14780 707 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 IER3P46695 156 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 PRSS12P56730 875 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 PSME3P61289 254 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 RELBQ01201 579 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 ZNF92Q03936 586 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 MICBQ29980 383 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 CDONQ4KMG0 1287 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 SLC35F1Q5T1Q4 408 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 CGB2Q6NT52 195 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 C8orf82Q6P1X6 216 aaPredicted RBP11.01□□□□□ -0.65
HMGB3-204ENST00000448905 CMTM4Q8IZR5 234 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 PROKR2Q8NFJ6 384 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 OR2T4Q8NH00 348 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 OR8S1Q8NH09 359 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 GNPDA2Q8TDQ7 276 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 DHRS1Q96LJ7 313 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 TBX15Q96SF7 602 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 RASSF4Q9H2L5 321 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 GORASP2Q9H8Y8 452 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 TCF7L1Q9HCS4 588 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 SPAG4Q9NPE6 437 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 KPTNQ9Y664 436 aa11.01□□□□□ -0.65
HMGB3-204ENST00000448905 A0A1B0GVI7 797 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 OR6C68A6NDL8 312 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 DVL1O14640 695 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 GPR137BO60478 399 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 CLPXO76031 633 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 GYPAP02724 150 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 MUC1P15941 1255 aaPredicted RBP11□□□□□ -0.65
HMGB3-204ENST00000448905 EEF1B2P24534 225 aaKnown RBP11□□□□□ -0.65
HMGB3-204ENST00000448905 NAA10P41227 235 aaPredicted RBP11□□□□□ -0.65
HMGB3-204ENST00000448905 SLC15A1P46059 708 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 SPIBQ01892 262 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 KHDRBS1Q07666 443 aaKnown RBP eCLIP11□□□□□ -0.65
HMGB3-204ENST00000448905 RPL13AP3Q6NVV1 102 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 SLC36A1Q7Z2H8 476 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 OR52L1Q8NGH7 329 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 LINC01006Q8NI28 216 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 ST8SIA4Q92187 359 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 RBM4BQ9BQ04 359 aaKnown RBP11□□□□□ -0.65
HMGB3-204ENST00000448905 COPS4Q9BT78 406 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 RNPEPL1Q9HAU8 725 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 PNRC2Q9NPJ4 139 aaKnown RBP11□□□□□ -0.65
HMGB3-204ENST00000448905 CENPMQ9NSP4 180 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 CTSZQ9UBR2 303 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 N6AMT1Q9Y5N5 214 aa11□□□□□ -0.65
HMGB3-204ENST00000448905 TRRAPQ9Y4A5 3859 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 XRCC2O43543 280 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 TIPRLO75663 272 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 LHBP01229 141 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 IGHV4-59P01825 116 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 APOC1P02654 83 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 FBP1P09467 338 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 FMO3P31513 532 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 TSPAN31Q12999 210 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 ASPHD2Q6ICH7 369 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 LDLRAD3Q86YD5 345 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 LNX2Q8N448 690 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 LINC00471Q8N535 108 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 FAM86B1Q8N7N1 296 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 SDR9C7Q8NEX9 313 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 MAP6Q96JE9 813 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 KCNJ15Q99712 375 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 FUZQ9BT04 418 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 SIRPDQ9H106 197 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 ABCD2Q9UBJ2 740 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 RPUSD1Q9UJJ7 312 aaKnown RBP10.99□□□□□ -0.65
HMGB3-204ENST00000448905 TGP01266 2768 aa10.99□□□□□ -0.65
HMGB3-204ENST00000448905 A0A0U1RQK1 487 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 NDUFB3O43676 98 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 KRT36O76013 467 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 FABP3P05413 133 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 H2AFXP16104 143 aaPredicted RBP10.98□□□□□ -0.65
HMGB3-204ENST00000448905 CFL1P23528 166 aaKnown RBP10.98□□□□□ -0.65
HMGB3-204ENST00000448905 RRM2P31350 389 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 TGFBR2P37173 567 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 PRKXP51817 358 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 BLVRAP53004 296 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 GUCA2AQ02747 115 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 POU4F2Q12837 409 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 SNCBQ16143 134 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 SNAI3Q3KNW1 292 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 HSP90B2PQ58FF3 399 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 GLYATL3Q5SZD4 288 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 TEX36Q5VZQ5 186 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 ZNF826PQ6ZT77 177 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 DPY19L4Q7Z388 723 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 DCXRQ7Z4W1 244 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 FAM90A1Q86YD7 464 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 FTMTQ8N4E7 242 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 ZSCAN4Q8NAM6 433 aaPredicted RBP10.98□□□□□ -0.65
HMGB3-204ENST00000448905 OR2AE1Q8NHA4 323 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 CCDC134Q9H6E4 229 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 SMURF1Q9HCE7 757 aa10.98□□□□□ -0.65
HMGB3-204ENST00000448905 MRPL22Q9NWU5 206 aaKnown RBP10.98□□□□□ -0.65
HMGB3-204ENST00000448905 ONECUT1Q9UBC0 465 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms