RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CDNFQ49AH0 187 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 SLC25A53Q5H9E4 307 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 WIPI1Q5MNZ9 446 aaPredicted RBP13.05□□□□□ -0.32
SF1-211ENST00000448404 DNM1P46Q6ZS02 220 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 RBPMSQ93062 196 aaKnown RBP13.05□□□□□ -0.32
SF1-211ENST00000448404 DEPPQ9NTK1 212 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 ZNF581Q9P0T4 197 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 SCP2D1Q9UJQ7 156 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 FXYD6-FXYD2A0A087WZ82 144 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 IGKV1-9A0A0C4DH69 117 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 LDLRAD4O15165 306 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 CD63P08962 238 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 UBCP0CG48 685 aaKnown RBP13.05□□□□□ -0.32
SF1-211ENST00000448404 RRASP10301 218 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 FAHP16930 419 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 PI3P19957 117 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 MSX1P28360 303 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 ZNF93P35789 620 aaPredicted RBP13.05□□□□□ -0.32
SF1-211ENST00000448404 SPINK14Q6IE38 97 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 TRAPPC6BQ86SZ2 158 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 OR5AS1Q8N127 324 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 LINC00052Q96N35 136 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 FXYD6Q9H0Q3 95 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 UBQLN2Q9UHD9 624 aa13.05□□□□□ -0.32
SF1-211ENST00000448404 GVINP1Q7Z2Y8 2422 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 LOC102723996A0A087X1L8 192 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 IGLV3-32A0A0A0MS00 114 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 A0A1W2PNU3 283 aaPredicted RBP13.04□□□□□ -0.32
SF1-211ENST00000448404 ZNF878C9JN71 531 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 IFNA7P01567 189 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 ISG15P05161 165 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 HCKP08631 526 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 ZNF20P17024 532 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 FOLR3P41439 243 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 C9orf135Q5VTT2 229 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 GLIPR1L1Q6UWM5 242 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 ST8SIA4Q92187 359 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 SEC22AQ96IW7 307 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 LYZL4Q96KX0 146 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
SF1-211ENST00000448404 ZNF205O95201 554 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 LDOC1O95751 146 aaPredicted RBP13.04□□□□□ -0.32
SF1-211ENST00000448404 PMP2P02689 132 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 FSTP19883 344 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 CSNK1A1P48729 337 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
SF1-211ENST00000448404 RSPO1Q2MKA7 263 aaPredicted RBP13.04□□□□□ -0.32
SF1-211ENST00000448404 TUSC1Q2TAM9 212 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 CLLU1Q5K131 121 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 PPP1R32Q7Z5V6 425 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 BPIFB2Q8N4F0 458 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 OR6X1Q8NH79 312 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 PIGTQ969N2 578 aa13.04□□□□□ -0.32
SF1-211ENST00000448404 ZNF845Q96IR2 970 aaPredicted RBP13.04□□□□□ -0.32
SF1-211ENST00000448404 NAP1L6A6NFF2 107 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 ZNF736B4DX44 427 aaPredicted RBP13.03□□□□□ -0.32
SF1-211ENST00000448404 CSF1P09603 554 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 MRPS10P82664 201 aaKnown RBP13.03□□□□□ -0.32
SF1-211ENST00000448404 ATXN7L3Q14CW9 347 aaPredicted RBP13.03□□□□□ -0.32
SF1-211ENST00000448404 ZIC4Q8N9L1 334 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 OR13C8Q8NGS7 320 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 ST8SIA2Q92186 375 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 MRGPRFQ96AM1 343 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 RADILQ96JH8 1075 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 GPER1Q99527 375 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 MRI1Q9BV20 369 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 ZNF700Q9H0M5 742 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 WDR54Q9H977 334 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 KCNK7Q9Y2U2 307 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 LOXL2Q9Y4K0 774 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 NPIPA2E9PIF3 369 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 NPIPA3F8WFD2 350 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 CYB5AP00167 134 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 LPLP06858 475 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 CELA3AP09093 270 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 RAB3AP20336 220 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 HRH1P35367 487 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 RAG2P55895 527 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 MC2RQ01718 297 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 SRYQ05066 204 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 SLC23A3Q6PIS1 610 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 OPN5Q6U736 354 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 RHOUQ7L0Q8 258 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 GTPBP8Q8N3Z3 284 aaPredicted RBP13.03□□□□□ -0.32
SF1-211ENST00000448404 OR14L1PQ8NHC6 308 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 TMEM41AQ96HV5 264 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 ZC3H10Q96K80 434 aaKnown RBP13.03□□□□□ -0.32
SF1-211ENST00000448404 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
SF1-211ENST00000448404 HSPB2A8KAH6 182 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 CXCL13O43927 109 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 RAD51DO75771 328 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 ZNF735P0CB33 412 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 CXADRP78310 365 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 SORDQ00796 357 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 HSPB2Q16082 182 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 SNAI3Q3KNW1 292 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 BEX5Q5H9J7 111 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 PLAC9Q5JTB6 97 aa13.03□□□□□ -0.32
SF1-211ENST00000448404 ATPAF1Q5TC12 328 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms