RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NPTNQ9Y639 398 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 LRRC7Q96NW7 1537 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 NMUP48645 174 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 PWWP2BQ6NUJ5 590 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ABHD15Q6UXT9 468 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 PMCHL2Q9BQD1 86 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 SLC46A2Q9BY10 475 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ANGPTL4Q9BY76 406 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 GKN1Q9NS71 199 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF608Q9ULD9 1512 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-202ENST00000448238 M0QYG6 137 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 WNT3P56703 355 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 HTRA3P83110 453 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ASAH1Q13510 395 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 NAGSQ8N159 534 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 ARL6IP6Q8N6S5 226 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 RAB40CQ96S21 281 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 OCIAD1Q9NX40 245 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 SLC17A4Q9Y2C5 497 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 MTCL1Q9Y4B5 1905 aaKnown RBP8.17□□□□□ -1.1
NIPBL-202ENST00000448238 PNLIPRP2P54317 469 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 FPGSQ05932 587 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 GLIPR1L1Q6UWM5 242 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 CLEC20AQ6ZU45 233 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 OR8A1Q8NGG7 326 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 UNC13BO14795 1591 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 PLCE1Q9P212 2302 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 VNN1O95497 513 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 OPRK1P41145 380 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 SYPL2Q5VXT5 272 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 FAM71F2Q6NXP2 309 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 SCAMP5Q8TAC9 235 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 TMPRSS13Q9BYE2 586 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 UQCC1Q9NVA1 299 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 HSFX1Q9UBD0 423 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 MEIKINA0A087WXM9 373 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 TRGV10A0A0A0MS01 117 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 KIR2DS5A0A0G2JLQ3 304 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 A0A0G2JNG1 304 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 KIR2DS3K7RE56 304 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 WNT10BO00744 389 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 BRS3P32247 399 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 TMEM267Q0VDI3 215 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-202ENST00000448238 KIR2DS5Q14953 304 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 Q6ZVL8 140 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 OR52N1Q8NH53 320 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 OR6C1Q96RD1 312 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 CACNG5Q9UF02 275 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 OR51B4Q9Y5P0 310 aa8.17□□□□□ -1.1
NIPBL-202ENST00000448238 TRBV11-1A0A0K0K1C0 115 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 M0R135 149 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SEMA4FO95754 770 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 P01737 135 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SSR4P51571 173 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 CLDN17P56750 224 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 TMEM176BQ3YBM2 270 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-202ENST00000448238 OR10AG1Q8NH19 301 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 ADAMTS17Q8TE56 1095 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF799Q96GE5 643 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF778Q96MU6 729 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 NAV3Q8IVL0 2385 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 CEP152O94986 1710 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 IL4P05112 153 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 PRSS2P07478 247 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 HKR1P10072 659 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 CSF2RBP32927 897 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 PRSS8Q16651 343 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF542PQ5EBM4 170 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 PAPPA-AS1Q5QFB9 102 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 TBPL2Q6SJ96 375 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 DCBLD2Q96PD2 775 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 TIMP4Q99727 224 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF2Q9BSG1 426 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-202ENST00000448238 RNF17Q9BXT8 1623 aaKnown RBP8.16□□□□□ -1.1
NIPBL-202ENST00000448238 FAM221AA4D161 298 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 TYROBPO43914 113 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 OR8G3PP0DMU2 310 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF789Q5FWF6 425 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 RHBDD2Q6NTF9 364 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 ZDHHC24Q6UX98 284 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 CAMKMTQ7Z624 323 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 TMIGD2Q96BF3 282 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SIRT7Q9NRC8 400 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 CHST2Q9Y4C5 530 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 CHD2O14647 1828 aaKnown RBP8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SLC25A20O43772 301 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SMPD2O60906 423 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 LEFTY1O75610 366 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 PPP1R17O96001 155 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 TEAD1P28347 426 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SERF2P84101 59 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 RING1Q06587 406 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 OR4S2Q8NH73 311 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SLC25A43Q8WUT9 341 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-202ENST00000448238 RPEQ96AT9 228 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 SLIT1O75093 1534 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 GPR17Q13304 367 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 VGLL4Q14135 290 aa8.16□□□□□ -1.1
NIPBL-202ENST00000448238 B3GNT8Q7Z7M8 397 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms