RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 Q96MF0 132 aa11.16□□□□□ -0.62
ERGIC3-209ENST00000447986 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
ERGIC3-209ENST00000447986 SAP30LQ9HAJ7 183 aa11.16□□□□□ -0.62
ERGIC3-209ENST00000447986 LRBAP50851 2863 aa11.16□□□□□ -0.62
ERGIC3-209ENST00000447986 IGHV1-46P01743 117 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 ADH4P08319 380 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 GNAO1P09471 354 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 PDLIM4P50479 330 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 CCL8P80075 99 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 CDK5R2Q13319 367 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 MED21Q13503 144 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 CARTPTQ16568 116 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 TSTQ16762 297 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 C6orf52Q5T4I8 152 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 SSX6Q7RTT6 188 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 COMMD2Q86X83 199 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 TGIF2LYQ8IUE0 185 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 ZNF525Q8N782 197 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 OR2Z1Q8NG97 314 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 UBASH3BQ8TF42 649 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 ITFG2Q969R8 447 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 SGK3Q96BR1 496 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 PBOV1Q9GZY1 135 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 TMEM100Q9NV29 134 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 FAM206AQ9NX38 181 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 MRM2Q9UI43 246 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 GNG8Q9UK08 70 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 SNX5Q9Y5X3 404 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 R4GMQ9 66 aa11.15□□□□□ -0.62
ERGIC3-209ENST00000447986 A0A0U1RQV5 110 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 LOC390937A0A1W2PQ73 354 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 ZSCAN5BA6NJL1 495 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 CD300LBA8K4G0 201 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 PRR32B1ATL7 298 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 J3QRE1 110 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 NDUFS8O00217 210 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 LY6HO94772 140 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 RPP14O95059 124 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 TNFRSF1AP19438 455 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 DCKP27707 260 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 MAGEB1P43366 347 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 TNFAIP6P98066 277 aaPredicted RBP11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 ZNF85Q03923 595 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 SMN1Q16637 294 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 TMEM255AQ5JRV8 349 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 BCL2L15Q5TBC7 163 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 ZNF540Q8NDQ6 660 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 OR8B12Q8NGG6 310 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 RDH5Q92781 318 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 ELMOD3Q96FG2 381 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 IL19Q9UHD0 177 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 NUFIP1Q9UHK0 495 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 CSMD1Q96PZ7 3565 aa11.14□□□□□ -0.63
ERGIC3-209ENST00000447986 ANKRD30BLA7E2S9 258 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MAGEB4O15481 346 aaPredicted RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MTRF1O75570 445 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 IGHA1P01876 353 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 CD55P08174 381 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MYL12AP19105 171 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 CSNK2BP67870 215 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MRPS11P82912 194 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 FAM3AP98173 230 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 GALEQ14376 348 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 CDONQ4KMG0 1287 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 TP53I3Q53FA7 332 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 ZNF684Q5T5D7 378 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 LIPNQ5VXI9 398 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 ZNF786Q8N393 782 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 CSNK2A3Q8NEV1 391 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 OR52I1Q8NGK6 324 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 GTF3AQ92664 365 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 SLC30A2Q9BRI3 323 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 PIMREGQ9BSJ6 248 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 ALG8Q9BVK2 526 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 DLL4Q9NR61 685 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MRPL15Q9P015 296 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 OR52A1Q9UKL2 312 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MYRFQ9Y2G1 1151 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 hCG_38984A0A1B0GV85 526 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 EFCAB10A6NFE3 127 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 FAM20BO75063 409 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 PNPP00491 289 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 HPXP02790 462 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 ATP6V1B1P15313 513 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 SLC25A16P16260 332 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 ACHEP22303 614 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 GNALP38405 381 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 SRP9P49458 86 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 GSK3AP49840 483 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MFGE8Q08431 387 aaPredicted RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 MRPL28Q13084 256 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 HFEQ30201 348 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 Q6ZR03 302 aa11.13□□□□□ -0.63
ERGIC3-209ENST00000447986 LHFPL3Q86UP9 236 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms