RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 RP2O75695 350 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 ATP6V1G2O95670 118 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 IGHV4-31P0DP07 118 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.18
SF3A1-204ENST00000447376 CAPGP40121 348 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 HCCSP53701 268 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 CDH15P55291 814 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 ADARB1P78563 741 aaKnown RBP13.9□□□□□ -0.18
SF3A1-204ENST00000447376 SNCBQ16143 134 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 C6orf52Q5T4I8 152 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 RNFT2Q96EX2 444 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 PGAM5Q96HS1 289 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 AMELYQ99218 206 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 OR10A2Q9H208 303 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 NARFLQ9H6Q4 476 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 IKZF2Q9UKS7 526 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 KCNS2Q9ULS6 477 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 RRP15Q9Y3B9 282 aaKnown RBP13.9□□□□□ -0.18
SF3A1-204ENST00000447376 RPL36Q9Y3U8 105 aaKnown RBP13.9□□□□□ -0.18
SF3A1-204ENST00000447376 HSPE1-MOB4S4R3N1 261 aa13.9□□□□□ -0.18
SF3A1-204ENST00000447376 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-204ENST00000447376 ISPDA4D126 451 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 LRP5LA4QPB2 252 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 LILRA1O75019 489 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 SLC2A1P11166 492 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 GABRB1P18505 474 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 PCMT1P22061 227 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 DDOSTP39656 456 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 CXCR4P61073 352 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 ACTC1P68032 377 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 ACTA1P68133 377 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 ROM1Q03395 351 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 MVKQ03426 396 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 EGR3Q06889 387 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 MZT1Q08AG7 82 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 SNAI3Q3KNW1 292 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 TMEM255AQ5JRV8 349 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 ZNF322Q6U7Q0 402 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-204ENST00000447376 LRRN1Q6UXK5 716 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 Q6ZR03 302 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 ZNF679Q8IYX0 411 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 C8orf59Q8N0T1 100 aaPredicted RBP13.89□□□□□ -0.19
SF3A1-204ENST00000447376 FTMTQ8N4E7 242 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 OR10H4Q8NGA5 316 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 RAB39BQ96DA2 213 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 MRPL48Q96GC5 212 aaKnown RBP13.89□□□□□ -0.19
SF3A1-204ENST00000447376 OR2V2Q96R30 315 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 SLC30A2Q9BRI3 323 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 RGCCQ9H4X1 137 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 BRD7Q9NPI1 651 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 KLHDC2Q9Y2U9 406 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 CHD3Q12873 2000 aaKnown RBP13.89□□□□□ -0.19
SF3A1-204ENST00000447376 HIVEP2P31629 2446 aa13.89□□□□□ -0.19
SF3A1-204ENST00000447376 LRRC30A6NM36 301 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 GMDSO60547 372 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 TGFAP01135 160 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 KRT8P05787 483 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 HNF1AP20823 631 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 DCTDP32321 178 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 RIDAP52758 137 aaKnown RBP13.88□□□□□ -0.19
SF3A1-204ENST00000447376 ZNF92Q03936 586 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 KRTAP1-1Q07627 177 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 OR8G1Q15617 311 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 GFOD2Q3B7J2 385 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 ZNF829Q3KNS6 432 aaPredicted RBP13.88□□□□□ -0.19
SF3A1-204ENST00000447376 KLHL22Q53GT1 634 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 GLYATL3Q5SZD4 288 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 AVPI1Q5T686 147 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 FAM57BQ71RH2 274 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 C1orf87Q8N0U7 546 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 LINC01356Q8N9X3 169 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 OR10AD1Q8NGE0 317 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 OR2AE1Q8NHA4 323 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 CLDND2Q8NHS1 167 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 ITLN1Q8WWA0 313 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 NRG4Q8WWG1 115 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 OR8B4Q96RC9 309 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 REPIN1Q9BWE0 567 aaKnown RBP13.88□□□□□ -0.19
SF3A1-204ENST00000447376 TREM2Q9NZC2 230 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 ZNF391Q9UJN7 358 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 LRP12Q9Y561 859 aa13.88□□□□□ -0.19
SF3A1-204ENST00000447376 IRGMA1A4Y4 181 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 ACOD1A6NK06 481 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 ANKRD30BLA7E2S9 258 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 CD300LBA8K4G0 201 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 LMX1BO60663 402 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 APOL3O95236 402 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 FADS2O95864 444 aaKnown RBP13.87□□□□□ -0.19
SF3A1-204ENST00000447376 DBTP11182 482 aaKnown RBP13.87□□□□□ -0.19
SF3A1-204ENST00000447376 IRF2P14316 349 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 HSPA13P48723 471 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 ZNF121P58317 390 aaPredicted RBP13.87□□□□□ -0.19
SF3A1-204ENST00000447376 PSMA6P60900 246 aaKnown RBP13.87□□□□□ -0.19
SF3A1-204ENST00000447376 ZNF91Q05481 1191 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 PLEKHG7Q6ZR37 379 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 KLBQ86Z14 1044 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 SPERTQ8NA61 448 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 MSI2Q96DH6 328 aaKnown RBP13.87□□□□□ -0.19
SF3A1-204ENST00000447376 REEP6Q96HR9 211 aa13.87□□□□□ -0.19
SF3A1-204ENST00000447376 TBX5Q99593 518 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms