RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CLDN25C9JDP6 229 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 PHYHO14832 338 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 RPP14O95059 124 aaKnown RBP10.1□□□□□ -0.79
RFC4-208ENST00000447345 CD55P08174 381 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 ADH4P08319 380 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 GABRB1P18505 474 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 CA6P23280 308 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 CRYBB2P43320 205 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 MTNR1AP48039 350 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 RIDAP52758 137 aaKnown RBP10.1□□□□□ -0.79
RFC4-208ENST00000447345 IL5RAQ01344 420 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 MVKQ03426 396 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 KRTAP1-1Q07627 177 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 LOXL1Q08397 574 aaPredicted RBP10.1□□□□□ -0.79
RFC4-208ENST00000447345 RIN1Q13671 783 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 OR8G1Q15617 311 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 TMEM249Q2WGJ8 235 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 MEDAGQ5VYS4 303 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 RHOUQ7L0Q8 258 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 ZNF679Q8IYX0 411 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 OR52H1Q8NGJ2 320 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 OR13G1Q8NGZ3 307 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 SGK3Q96BR1 496 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 RDH12Q96NR8 316 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 SLC30A2Q9BRI3 323 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
RFC4-208ENST00000447345 OPA3Q9H6K4 179 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 DCLRE1BQ9H816 532 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 SP140LQ9H930 580 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 TMEM100Q9NV29 134 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 FAM206AQ9NX38 181 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 DCAF16Q9NXF7 216 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.1□□□□□ -0.79
RFC4-208ENST00000447345 hCG_38984A0A1B0GV85 526 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 ISPDA4D126 451 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 H0YHG0 523 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 WNT9BO14905 357 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 CASQ2O14958 399 aaPredicted RBP10.09□□□□□ -0.79
RFC4-208ENST00000447345 SLC16A6O15403 523 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 KRT8P05787 483 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 HEXAP06865 529 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 ZNF16P17020 682 aaPredicted RBP10.09□□□□□ -0.79
RFC4-208ENST00000447345 TNFRSF1AP19438 455 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 IL2RGP31785 369 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 MRPS11P82912 194 aaKnown RBP10.09□□□□□ -0.79
RFC4-208ENST00000447345 FAM3AP98173 230 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 ROM1Q03395 351 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 ZNF91Q05481 1191 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 TMED1Q13445 227 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 OCLNQ16625 522 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 ZNF829Q3KNS6 432 aaPredicted RBP10.09□□□□□ -0.79
RFC4-208ENST00000447345 OGFRL1Q5TC84 451 aaPredicted RBP10.09□□□□□ -0.79
RFC4-208ENST00000447345 PRAMEF6Q5VXH4 476 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 PACRGLQ8N7B6 248 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 YIPF7Q8N8F6 280 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 ZNF540Q8NDQ6 660 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 ZNF420Q8TAQ5 688 aaPredicted RBP10.09□□□□□ -0.79
RFC4-208ENST00000447345 APH1BQ8WW43 257 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 SPSB4Q96A44 273 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 MEGF10Q96KG7 1140 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 MNTQ99583 582 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 SOX7Q9BT81 388 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 AMBNQ9NP70 447 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 IL19Q9UHD0 177 aa10.09□□□□□ -0.79
RFC4-208ENST00000447345 MRM2Q9UI43 246 aaKnown RBP10.09□□□□□ -0.79
RFC4-208ENST00000447345 SETD2Q9BYW2 2564 aaPredicted RBP10.08□□□□□ -0.8
RFC4-208ENST00000447345 SNTNA6NMZ2 147 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 ANKRD30BLA7E2S9 258 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 LOC110117498-PIK3R3F6TDL0 507 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 MPZL2O60487 215 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 ZNF254O75437 659 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 PNPP00491 289 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 OR2T7P0C7T2 308 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 IGHV4-31P0DP07 118 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 DBTP11182 482 aaKnown RBP10.08□□□□□ -0.8
RFC4-208ENST00000447345 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
RFC4-208ENST00000447345 GSK3AP49840 483 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 MMP16P51512 607 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 CHN2P52757 468 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 SLC34A1Q06495 639 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 EGR3Q06889 387 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 TP53I3Q53FA7 332 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 BCL2L15Q5TBC7 163 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 ZNF691Q5VV52 312 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 DEGS2Q6QHC5 323 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 MOGAT3Q86VF5 341 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 OR2T27Q8NH04 317 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 CNIH3Q8TBE1 160 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 PPP1R14AQ96A00 147 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 LGALS12Q96DT0 336 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 FAM71F1Q96KD3 344 aaPredicted RBP10.08□□□□□ -0.8
RFC4-208ENST00000447345 LYZL4Q96KX0 146 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 ADI1Q9BV57 179 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 PAPOLGQ9BWT3 736 aaKnown RBP10.08□□□□□ -0.8
RFC4-208ENST00000447345 PBOV1Q9GZY1 135 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 PPP1R3EQ9H7J1 279 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 C8orf4Q9NR00 106 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 UFSP2Q9NUQ7 469 aa10.08□□□□□ -0.8
RFC4-208ENST00000447345 GNG8Q9UK08 70 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms