RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 HAGHLQ6PII5 290 aaPredicted RBP16.92■□□□□ 0.3
SDCBP-204ENST00000447182 IL34Q6ZMJ4 242 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 PLPP5Q8NEB5 264 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 OR2I1PQ8NGU4 316 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 KCNG3Q8TAE7 436 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 RAB3CQ96E17 227 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 MRPL13Q9BYD1 178 aaKnown RBP16.92■□□□□ 0.3
SDCBP-204ENST00000447182 SRPK3Q9UPE1 567 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 SPTBN5Q9NRC6 3674 aaKnown RBP16.92■□□□□ 0.3
SDCBP-204ENST00000447182 SZT2Q5T011 3432 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 A0A1W2PNV4 684 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 LIPT2A6NK58 231 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF20P17024 532 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 AKR1C2P52895 323 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 AKR1C1Q04828 323 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 PLAC9Q5JTB6 97 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 PRSS54Q6PEW0 395 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 GLIPR1L1Q6UWM5 242 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 PEG10Q86TG7 708 aaKnown RBP16.91■□□□□ 0.3
SDCBP-204ENST00000447182 OR5AS1Q8N127 324 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 NUBPLQ8TB37 319 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 OR51E1Q8TCB6 317 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 C5orf34Q96MH7 638 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 SCGB3A2Q96PL1 93 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 OCSTAMPQ9BR26 566 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 ALKBH4Q9NXW9 302 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 MRPS28Q9Y2Q9 187 aaKnown RBP16.91■□□□□ 0.3
SDCBP-204ENST00000447182 A0A1W2PR77 199 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 F8W036 122 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 ARL4DP49703 201 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 BIDP55957 195 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 BLOC1S1P78537 153 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 FAM189A2Q15884 450 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 C14orf28Q4W4Y0 310 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 THEM4Q5T1C6 240 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 CLEC18BQ6UXF7 455 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 TMPPEQ6ZT21 453 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 LANCL3Q6ZV70 420 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 TMPRSS9Q7Z410 1059 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 SPAG16Q8N0X2 631 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 TMEM104Q8NE00 496 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 OR4A4PQ8NGN8 299 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 CNTNAP3BQ96NU0 1288 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 AQP10Q96PS8 301 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 SEC11CQ9BY50 192 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 SAV1Q9H4B6 383 aaPredicted RBP16.91■□□□□ 0.3
SDCBP-204ENST00000447182 SERINC1Q9NRX5 453 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 RPH3AQ9Y2J0 694 aaPredicted RBP16.91■□□□□ 0.3
SDCBP-204ENST00000447182 FLVCR1Q9Y5Y0 555 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 EXPH5Q8NEV8 1989 aa16.91■□□□□ 0.3
SDCBP-204ENST00000447182 ETV2O00321 342 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-204ENST00000447182 CDC14BO60729 498 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 FPR2P25090 351 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 CD38P28907 300 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 DEFB133Q30KQ1 61 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 PLEKHN1Q494U1 663 aaPredicted RBP16.9■□□□□ 0.3
SDCBP-204ENST00000447182 TMEM88Q6PEY1 159 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 Q6ZS52 159 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 PGAP1Q75T13 922 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 RAB11FIP2Q7L804 512 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 D2HGDHQ8N465 521 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 TMED6Q8WW62 240 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 B3GAT1Q9P2W7 334 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 FER1L5A0AVI2 2057 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 A0A1B0GX78 115 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 RHPN2P1A8MT19 583 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF878C9JN71 531 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 LMO7DNF2Z398 122 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 SOCS1O15524 211 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 BCKDHBP21953 392 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 TMEM50BP56557 158 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 SHEQ5VZ18 495 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 RNF144BQ7Z419 303 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 TMEM41AQ96HV5 264 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 EMC6Q9BV81 110 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 MLXQ9UH92 298 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 LHFPL6Q9Y693 200 aa16.9■□□□□ 0.3
SDCBP-204ENST00000447182 VSTM2BA6NLU5 285 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 SNAPINO95295 136 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 MPIG6BO95866 241 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 FOSL2P15408 326 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 CBX5P45973 191 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 HOXA1P49639 335 aaPredicted RBP16.89■□□□□ 0.29
SDCBP-204ENST00000447182 NPY4RP50391 375 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 SUPT4H1P63272 117 aaKnown RBP16.89■□□□□ 0.29
SDCBP-204ENST00000447182 SRSF3P84103 164 aaKnown RBP16.89■□□□□ 0.29
SDCBP-204ENST00000447182 PJVKQ0ZLH3 352 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 MST1LQ2TV78 715 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 H3F3CQ6NXT2 135 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 LHFPL1Q86WI0 220 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 TMEM59Q9BXS4 323 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 TLNRD1Q9H1K6 362 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 LPAR3Q9UBY5 353 aa16.89■□□□□ 0.29
SDCBP-204ENST00000447182 C2orf72A6NCS6 295 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 MFNGO00587 321 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 ABOP16442 354 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 PVALBP20472 110 aaPredicted RBP16.88■□□□□ 0.29
SDCBP-204ENST00000447182 FBXW4P57775 412 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 FOXF1Q12946 379 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 NSUN5P2Q63ZY6 315 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms