RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ZNF891A8MT65 544 aaPredicted RBP13.74□□□□□ -0.21
SNX13-204ENST00000444712 NKX2-8O15522 239 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 YES1P07947 543 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 CPN1P15169 458 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 PMPCAQ10713 525 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 TSPO2Q5TGU0 170 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 IGFL2Q6UWQ7 119 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 ZNF627Q7L945 461 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 ZBTB8BQ8NAP8 495 aaPredicted RBP13.74□□□□□ -0.21
SNX13-204ENST00000444712 KCNK15Q9H427 330 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 ZDHHC11Q9H8X9 412 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 GP6Q9HCN6 339 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 ING3Q9NXR8 418 aa13.74□□□□□ -0.21
SNX13-204ENST00000444712 ZNF107Q9UII5 783 aaPredicted RBP13.74□□□□□ -0.21
SNX13-204ENST00000444712 TRAV6A0A075B6T7 132 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 PRAF2O60831 178 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 KDM4BO94953 1096 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 LPLP06858 475 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 ZNF24P17028 368 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 PSMB1P20618 241 aaKnown RBP13.73□□□□□ -0.21
SNX13-204ENST00000444712 HTR5AP47898 357 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 RSPO1Q2MKA7 263 aaPredicted RBP13.73□□□□□ -0.21
SNX13-204ENST00000444712 PCGF3Q3KNV8 242 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 KRTAP27-1Q3LI81 207 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 ZFP69Q49AA0 526 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 OR5AS1Q8N127 324 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 GPX8Q8TED1 209 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 OR2H1Q9GZK4 316 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 GHRLQ9UBU3 117 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 FCGR2AP12318 317 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 PRF1P14222 555 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
SNX13-204ENST00000444712 CCL11P51671 97 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 CCR6P51684 374 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 RTP5Q14D33 572 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 ZNF774Q6NX45 483 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 ANGPTL5Q86XS5 388 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 TUSC5Q8IXB3 177 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 FNDC9Q8TBE3 224 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 APH1AQ96BI3 265 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 CPNE2Q96FN4 548 aaPredicted RBP13.73□□□□□ -0.21
SNX13-204ENST00000444712 LYZL4Q96KX0 146 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 CHST5Q9GZS9 411 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 C20orf85Q9H1P6 137 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 CALHM2Q9HA72 323 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 UPB1Q9UBR1 384 aa13.73□□□□□ -0.21
SNX13-204ENST00000444712 MRPS28Q9Y2Q9 187 aaKnown RBP13.73□□□□□ -0.21
SNX13-204ENST00000444712 CNTRLQ7Z7A1 2325 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 ITGB2P05107 769 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 AKAIN1P0CW23 69 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 PSG4Q00888 419 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 NAA40Q86UY6 237 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 ZNF101Q8IZC7 436 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 TCTE3Q8IZS6 198 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 KCNG3Q8TAE7 436 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 GPER1Q99527 375 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 SLC7A10Q9NS82 523 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 MRPL15Q9P015 296 aaKnown RBP13.72□□□□□ -0.21
SNX13-204ENST00000444712 ZNF175Q9Y473 711 aa13.72□□□□□ -0.21
SNX13-204ENST00000444712 TMEM14DPA8MWL7 114 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 TM4SF5O14894 197 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 PEX14O75381 377 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 CHRM2P08172 466 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 DBHP09172 617 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 PTHLHP12272 177 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 QRFPP83859 136 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 BIVMQ86UB2 503 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 SKA3Q8IX90 412 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 FDCSPQ8NFU4 85 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 NKX3-1Q99801 234 aaPredicted RBP13.71□□□□□ -0.21
SNX13-204ENST00000444712 SOX7Q9BT81 388 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 WNT5BQ9H1J7 359 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 DEFB127Q9H1M4 99 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 MED28Q9H204 178 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 MCUBQ9NWR8 336 aa13.71□□□□□ -0.21
SNX13-204ENST00000444712 A0A0A6YYJ9 748 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 TRAV17A0A0B4J275 112 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 GMDSO60547 372 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 VSIG8P0DPA2 414 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 STOMP27105 288 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 TAS2R19P59542 299 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 CBX3Q13185 183 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 SEMA6DQ8NFY4 1073 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 SSC4DQ8WTU2 575 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 WDYHV1Q96HA8 205 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 LRFN3Q9BTN0 628 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 PIGLQ9Y2B2 252 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 LIPGQ9Y5X9 500 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 ARHGAP21Q5T5U3 1957 aa13.71□□□□□ -0.22
SNX13-204ENST00000444712 E9PLN8 166 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 XRCC2O43543 280 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 LCATP04180 440 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 MMP7P09237 267 aaPredicted RBP13.7□□□□□ -0.22
SNX13-204ENST00000444712 COX5BP10606 129 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 GTF2F2P13984 249 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 RCVRNP35243 200 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 ALDH3B1P43353 468 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 CD276Q5ZPR3 534 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms