RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 CT45A6P0DMU7 189 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CT45A5P0DMU8 189 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CT45A7P0DMV0 189 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 SLC2A1P11166 492 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 PVRP15151 417 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 ZNF250P15622 560 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CD36P16671 472 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 LOXP28300 417 aaPredicted RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 RPA3P35244 121 aaPredicted RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 RAB7AP51149 207 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 RPL19P84098 196 aaKnown RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 KRR1Q13601 381 aaKnown RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 GUSBP1Q15486 140 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 TRAM1Q15629 374 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CT45A1Q5HYN5 189 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 FAM120AOSQ5T036 256 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 TPTE2P1Q5T6R2 138 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 TRIQKQ629K1 86 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 HBMQ6B0K9 141 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 ZNF544Q6NX49 715 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 ZNF530Q6P9A1 599 aaPredicted RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 GDPD3Q7L5L3 318 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 TMEM150AQ86TG1 271 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 PRSS58Q8IYP2 241 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 PUSL1Q8N0Z8 303 aaKnown RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 KIR2DL5AQ8N109 375 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 POM121L12Q8N7R1 296 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 OR2V1Q8NHB1 315 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 KIR2DL5BQ8NHK3 375 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CT45A3Q8NHU0 189 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 DYNLL2Q96FJ2 89 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 RBP7Q96R05 134 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 VAT1Q99536 393 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 PHB2Q99623 299 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CGREF1Q99674 301 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 GPR22Q99680 433 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 MRPL45Q9BRJ2 306 aaKnown RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 AGMATQ9BSE5 352 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 LHX5Q9H2C1 402 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 ASB7Q9H672 318 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 ZNF442Q9H7R0 627 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 MEPEQ9NQ76 525 aaPredicted RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 XPNPEP1Q9NQW7 623 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 FBXO8Q9NRD0 319 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 GIN1Q9NXP7 522 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 PAIP2BQ9ULR5 123 aaKnown RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 RAB26Q9ULW5 256 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CPQQ9Y646 472 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 MTUS2Q5JR59 1369 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ABCC11Q96J66 1382 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 LOC110117498-PIK3R3F6TDL0 507 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 SMKR1H3BMG3 65 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 PSMD12O00232 456 aaPredicted RBP3.66□□□□□ -1.82
VPS50-206ENST00000443443 FABP7O15540 132 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 TNFSF12O43508 249 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 MGRN1O60291 552 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 SLC16A7O60669 478 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ENTPD6O75354 484 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 TYMSP04818 313 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ARG1P05089 322 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 RAB5AP20339 215 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 PSMA1P25786 263 aaKnown RBP3.66□□□□□ -1.82
VPS50-206ENST00000443443 SERPINB1P30740 379 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 GNRHRP30968 328 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 FCGR2CP31995 323 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CRYBA2P53672 197 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 AQP5P55064 265 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CLDN12P56749 244 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 OR10A3P58181 314 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 RANP62826 216 aaKnown RBP3.66□□□□□ -1.82
VPS50-206ENST00000443443 TGFBR3Q03167 851 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CD164Q04900 197 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 FASTKQ14296 549 aaKnown RBP3.66□□□□□ -1.82
VPS50-206ENST00000443443 SMCO1Q147U7 214 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 SPCS2Q15005 226 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 PON3Q15166 354 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 TAB1Q15750 504 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 MAPK14Q16539 360 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 TBC1D28Q2M2D7 210 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 TTLL9Q3SXZ7 439 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 FAM27D1Q5T7N8 215 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 UBE2UQ5VVX9 321 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 WDR25Q64LD2 544 aaPredicted RBP3.66□□□□□ -1.82
VPS50-206ENST00000443443 REP15Q6BDI9 236 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 TFAP2EQ6VUC0 442 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 LHFPL3Q86UP9 236 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 HORMAD1Q86X24 394 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 RIMKLAQ8IXN7 391 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 FAM71AQ8IYT1 594 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 PRR22Q8IZ63 422 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ATPAF2Q8N5M1 289 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 SAMD12Q8N8I0 201 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 OR52B6Q8NGF0 335 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 C11orf45Q8TAV5 145 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ACTRT1Q8TDG2 376 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CASTOR1Q8WTX7 329 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 RASSF5Q8WWW0 418 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms