RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 ZNF10P21506 573 aaPredicted RBP13.54□□□□□ -0.24
CHFR-204ENST00000443047 LCN6P62502 163 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 OR14K1Q8NGZ2 314 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 MARCH1Q8TCQ1 289 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 BLOC1S5-TXNDC5H3BN57 136 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 ZNF354AO60765 605 aaPredicted RBP13.54□□□□□ -0.24
CHFR-204ENST00000443047 UPK3AO75631 287 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 MBP02144 154 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 SFTPBP07988 381 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 MELTFP08582 738 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 NID1P14543 1247 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 RABIFP47224 123 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 RAB32Q13637 225 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 ALG10BQ5I7T1 473 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 GKN2Q86XP6 184 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 NPEPL1Q8NDH3 523 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 SPACA7Q96KW9 195 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 FOXN4Q96NZ1 517 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 PRRT1Q99946 306 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 LRRC61Q9BV99 259 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 LRP4O75096 1905 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 HEATR5AQ86XA9 2040 aa13.54□□□□□ -0.24
CHFR-204ENST00000443047 A0A1B0GWA3 101 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 EFSO43281 561 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 LYPD3O95274 346 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 CD1AP06126 327 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 HCKP08631 526 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 HRH1P35367 487 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 HMGN3Q15651 99 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 JAGN1Q8N5M9 183 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 CDRT4Q8N9R6 151 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 OR6N2Q8NGY6 317 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 S100A13Q99584 98 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 C2orf88Q9BSF0 95 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 LYRM4Q9HD34 91 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 SPACA6W5XKT8 324 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 SPAG17Q6Q759 2223 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 CSRP1P21291 193 aaKnown RBP13.53□□□□□ -0.24
CHFR-204ENST00000443047 RPS23P62266 143 aaKnown RBP13.53□□□□□ -0.24
CHFR-204ENST00000443047 PSG6Q00889 435 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 PMPCAQ10713 525 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 PNLIPRP3Q17RR3 467 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 KIAA0895LQ68EN5 471 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 TCEAL6Q6IPX3 200 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 ARMC6Q6NXE6 501 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 HEPN1Q6WQI6 88 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 LRRC69Q6ZNQ3 347 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 MAMDC2Q7Z304 686 aaPredicted RBP13.53□□□□□ -0.24
CHFR-204ENST00000443047 OOSP2Q86WS3 158 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 C19orf47Q8N9M1 422 aaKnown RBP13.53□□□□□ -0.24
CHFR-204ENST00000443047 MRPL37Q9BZE1 423 aaKnown RBP13.53□□□□□ -0.24
CHFR-204ENST00000443047 ZNF576Q9H609 170 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 FLRT3Q9NZU0 649 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 LAMP5Q9UJQ1 280 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 SPARCP09486 303 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 MAP3K8P41279 467 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 NKX6-1P78426 367 aaPredicted RBP13.53□□□□□ -0.24
CHFR-204ENST00000443047 AKR1C8PQ5T2L2 129 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 DPY19L4Q7Z388 723 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 C10orf53Q8N6V4 93 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 FAM46BQ96A09 425 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 MRGPRFQ96AM1 343 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 THOC3Q96J01 351 aaKnown RBP13.53□□□□□ -0.24
CHFR-204ENST00000443047 PTGES2Q9H7Z7 377 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 HS3ST3A1Q9Y663 406 aa13.53□□□□□ -0.24
CHFR-204ENST00000443047 UNC13CQ8NB66 2214 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 SEC14L6B5MCN3 397 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 C1QL1O75973 258 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 DUS4LO95620 317 aaKnown RBP13.52□□□□□ -0.24
CHFR-204ENST00000443047 DBIP07108 87 aaKnown RBP13.52□□□□□ -0.24
CHFR-204ENST00000443047 HLA-GP17693 338 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 CRABP1P29762 137 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 TRAPPC6BQ86SZ2 158 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 GATSQ8NAP1 163 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 FAM174AQ8TBP5 190 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 ZNF587Q96SQ5 575 aaPredicted RBP13.52□□□□□ -0.24
CHFR-204ENST00000443047 SERTAD3Q9UJW9 196 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 SLC22A13Q9Y226 551 aa13.52□□□□□ -0.24
CHFR-204ENST00000443047 TMEM184BQ9Y519 407 aaPredicted RBP13.52□□□□□ -0.24
CHFR-204ENST00000443047 ZNF587BE7ETH6 402 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 AGR2O95994 175 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 PRH1P02810 166 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 SULT1A2P50226 295 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 GFERP55789 205 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 FJX1Q86VR8 437 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 SLC41A2Q96JW4 573 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 OR5B2Q96R09 309 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 G6PC3Q9BUM1 346 aa13.52□□□□□ -0.25
CHFR-204ENST00000443047 TRBV5-5A0A0J9YX44 114 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 OR4C45A6NMZ5 311 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 GMFGO60234 142 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 BRINP1O60477 761 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 TACR3P29371 465 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 CYCSP99999 105 aaKnown RBP13.51□□□□□ -0.25
CHFR-204ENST00000443047 FHL1Q13642 323 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 MFSD8Q8NHS3 518 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 MALSU1Q96EH3 234 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 KLHDC7BQ96G42 594 aa13.51□□□□□ -0.25
CHFR-204ENST00000443047 SLC5A7Q9GZV3 580 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms