RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ARRDC1Q8N5I2 433 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 CREB3L1Q96BA8 519 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 CXorf58Q96LI9 332 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 PFDN5Q99471 154 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SPRR3Q9UBC9 169 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SF3B6Q9Y3B4 125 aaKnown RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 OR8G3PP0DMU2 310 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 RPS25P62851 125 aaKnown RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SIRPAP78324 504 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 RPP30P78346 268 aaKnown RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 C3AR1Q16581 482 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 GUCA2BQ16661 112 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF684Q5T5D7 378 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 KCTD18Q6PI47 426 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 RPTNQ6XPR3 784 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 RNASE11Q8TAA1 199 aaKnown RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 FNDC9Q8TBE3 224 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 HAVCR2Q8TDQ0 301 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 RNF128Q8TEB7 428 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 C11orf40Q8WZ69 217 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 TMEM54Q969K7 222 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 WDYHV1Q96HA8 205 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 TMED9Q9BVK6 235 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 ULBP2Q9BZM5 246 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 RNF122Q9H9V4 155 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 C19orf12Q9NSK7 152 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 CAMK2AQ9UQM7 478 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 TP53TG5Q9Y2B4 290 aa7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SIRT4Q9Y6E7 314 aaPredicted RBP7.14□□□□□ -1.27
CCDC39-201ENST00000442201 SPTBN4Q9H254 2564 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 IGKV3D-15A0A087WSY6 115 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 PRR32B1ATL7 298 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 LGALS8O00214 317 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 PLPP2O43688 288 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 SNAPC5O75971 98 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 HOXC12P31275 282 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 PTGFRP43088 359 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 TMPRSS3P57727 454 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 EIF2B1Q14232 305 aaKnown RBP7.13□□□□□ -1.27
CCDC39-201ENST00000442201 PCK2Q16822 640 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 LIPNQ5VXI9 398 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 RPL22L1Q6P5R6 122 aaKnown RBP7.13□□□□□ -1.27
CCDC39-201ENST00000442201 ETV3LQ6ZN32 361 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 CMSS1Q9BQ75 279 aaKnown RBP7.13□□□□□ -1.27
CCDC39-201ENST00000442201 ABHD6Q9BV23 337 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 METTL9Q9H1A3 318 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 MRM2Q9UI43 246 aaKnown RBP7.13□□□□□ -1.27
CCDC39-201ENST00000442201 FOXD3Q9UJU5 478 aaPredicted RBP7.13□□□□□ -1.27
CCDC39-201ENST00000442201 POLR1DQ9Y2S0 133 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 NCKAP5O14513 1909 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 ASPMQ8IZT6 3477 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 DHHO43323 396 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 AQP8O94778 261 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 PAX1P15863 534 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 CBR1P16152 277 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 EDNRAP25101 427 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 C10orf128Q5T292 105 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 DMKNQ6E0U4 476 aaPredicted RBP7.13□□□□□ -1.27
CCDC39-201ENST00000442201 CD200R1LQ6Q8B3 271 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 NLRC3Q7RTR2 1065 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 MCEMP1Q8IX19 187 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 SKA3Q8IX90 412 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 C20orf196Q8IYI0 205 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 ABHD17AQ96GS6 310 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 NARS2Q96I59 477 aaKnown RBP7.13□□□□□ -1.27
CCDC39-201ENST00000442201 OR8B4Q96RC9 309 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 AMELYQ99218 206 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 SSX3Q99909 188 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 BARHL1Q9BZE3 327 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 ASH2LQ9UBL3 628 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 GSTK1Q9Y2Q3 226 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 RAXQ9Y2V3 346 aa7.13□□□□□ -1.27
CCDC39-201ENST00000442201 TRBV2A0A0J9YWF9 115 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 A0A1B0GVI7 797 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 TRDV1A0A1B0GX56 115 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 HSPB2A8KAH6 182 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 K7EM74 188 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 TCAPO15273 167 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 OGG1O15527 345 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 LRRTM2O43300 516 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ATG12O94817 140 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RPP14O95059 124 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 HEXAP06865 529 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ANXA3P12429 323 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 PSMB10P40306 273 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF84P51523 738 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF133P52736 654 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 FABP5Q01469 135 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ROM1Q03395 351 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 CDK5R1Q15078 307 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RNPS1Q15287 305 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 TRAM1Q15629 374 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 HSPB2Q16082 182 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 TBR1Q16650 682 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 CDNFQ49AH0 187 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF679Q8IYX0 411 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 GPR137CQ8N3F9 429 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RBMXL3Q8N7X1 1067 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 OR52N5Q8NH56 324 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms