RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 ALX3O95076 343 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 COX5BP10606 129 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 ZNF20P17024 532 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
POLR1E-203ENST00000442009 EFNB2P52799 333 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 FAM214BQ7L5A3 538 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 P4HA3Q7Z4N8 544 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 COMMD2Q86X83 199 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 OR4D6Q8NGJ1 314 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 OR5M9Q8NGP3 310 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 OR13C9Q8NGT0 318 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 BCL2L2Q92843 193 aaPredicted RBP16.34■□□□□ 0.21
POLR1E-203ENST00000442009 C10orf35Q96D05 121 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 UQCC2Q9BRT2 126 aa16.34■□□□□ 0.21
POLR1E-203ENST00000442009 METTL17Q9H7H0 456 aaPredicted RBP16.34■□□□□ 0.21
POLR1E-203ENST00000442009 TMEM272A0A1B0GTI8 110 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 DHRS7CA6NNS2 312 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 HLA-HP01893 362 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 ALDOBP05062 364 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 TMIGD3P0DMS9 266 aaPredicted RBP16.33■□□□□ 0.21
POLR1E-203ENST00000442009 CDK2P24941 298 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 BCAP31P51572 246 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 GFOD2Q3B7J2 385 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 ACSF3Q4G176 576 aaPredicted RBP16.33■□□□□ 0.21
POLR1E-203ENST00000442009 HACD4Q5VWC8 232 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 DNM1P46Q6ZS02 220 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 C19orf18Q8NEA5 215 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 OR1K1Q8NGR3 316 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 RFT1Q96AA3 541 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 ABHD17AQ96GS6 310 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 SORCS2Q96PQ0 1159 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 NEDD4LQ96PU5 975 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 C1QTNF5Q9BXJ0 243 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 CNTD2Q9H8S5 307 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 NOX3Q9HBY0 568 aa16.33■□□□□ 0.21
POLR1E-203ENST00000442009 MRPS7Q9Y2R9 242 aaKnown RBP16.33■□□□□ 0.21
POLR1E-203ENST00000442009 LOC100509620A0A075B734 347 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 IGKV1-9A0A0C4DH69 117 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 LINC00854A0A1B0GVQ3 168 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 ERCC1P07992 297 aaPredicted RBP16.33■□□□□ 0.2
POLR1E-203ENST00000442009 TFAP2EQ6VUC0 442 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 IZUMO1Q8IYV9 350 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 JAGN1Q8N5M9 183 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 C9orf106Q8NAJ2 232 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 SMIM4Q8WVI0 70 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 PTX4Q96A99 478 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 ZFP3Q96NJ6 502 aa16.33■□□□□ 0.2
POLR1E-203ENST00000442009 CIB4A0PJX0 185 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 EEF1E1O43324 174 aaKnown RBP16.32■□□□□ 0.2
POLR1E-203ENST00000442009 XRCC3O43542 346 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 MTRF1O75570 445 aaKnown RBP16.32■□□□□ 0.2
POLR1E-203ENST00000442009 CTAG2O75638 210 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 FAM157BP0CG42 384 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 ARSBP15848 533 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 THBS4P35443 961 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 KIR2DL2P43627 348 aaPredicted RBP16.32■□□□□ 0.2
POLR1E-203ENST00000442009 QRFPP83859 136 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 DGCR2P98153 550 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 TNK1Q13470 666 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 TBR1Q16650 682 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 NSUN5P2Q63ZY6 315 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 UTS2BQ765I0 119 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 DPPA2Q7Z7J5 298 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 ZC3HAV1LQ96H79 300 aaKnown RBP16.32■□□□□ 0.2
POLR1E-203ENST00000442009 SLC22A4Q9H015 551 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 KCNK15Q9H427 330 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF391Q9UJN7 358 aa16.32■□□□□ 0.2
POLR1E-203ENST00000442009 CRYABP02511 175 aaKnown RBP16.31■□□□□ 0.2
POLR1E-203ENST00000442009 LCATP04180 440 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 GABRA1P14867 456 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 ARR3P36575 388 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 CAPZA1P52907 286 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 CRIP3Q6Q6R5 217 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 RNF144BQ7Z419 303 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 PP6455Q8WZ26 134 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 GPR137Q96N19 417 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 RNF121Q9H920 327 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 PLEKHA1Q9HB21 404 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 FBLN5Q9UBX5 448 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 INTS1Q8N201 2190 aaKnown RBP16.31■□□□□ 0.2
POLR1E-203ENST00000442009 CNOT4O95628 575 aaKnown RBP16.31■□□□□ 0.2
POLR1E-203ENST00000442009 PRF1P14222 555 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 RAB1AP62820 205 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 TMEM69Q5SWH9 247 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF324BQ6AW86 544 aaPredicted RBP16.31■□□□□ 0.2
POLR1E-203ENST00000442009 GCNT2Q8N0V5 402 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 CADM3Q8N126 398 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 OR2AE1Q8NHA4 323 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 SPSB4Q96A44 273 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF75AQ96N20 296 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 CHST5Q9GZS9 411 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 RGCCQ9H4X1 137 aa16.31■□□□□ 0.2
POLR1E-203ENST00000442009 RBFOX1Q9NWB1 397 aaKnown RBP16.31■□□□□ 0.2
POLR1E-203ENST00000442009 RBMX2Q9Y388 322 aaKnown RBP16.31■□□□□ 0.2
POLR1E-203ENST00000442009 LYRM1O43325 122 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 CD3GP09693 182 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 ACKR3P25106 362 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF93P35789 620 aaPredicted RBP16.3■□□□□ 0.2
POLR1E-203ENST00000442009 KIR2DL3P43628 341 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 TAS2R20P59543 309 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms