RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 OR10S1Q8NGN2 331 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR5M1Q8NGP8 315 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR2V1Q8NHB1 315 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR14L1PQ8NHC6 308 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 GRPEL2Q8TAA5 225 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 GIMAP1Q8WWP7 306 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ASB13Q8WXK3 278 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 MED30Q96HR3 178 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 HYLS1Q96M11 299 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 JSRP1Q96MG2 331 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 FAM173AQ9BQD7 235 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ULBP2Q9BZM5 246 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR51J1Q9H342 316 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 GHITMQ9H3K2 345 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 SLA2Q9H6Q3 261 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 GPN1Q9HCN4 374 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 RANGRFQ9HD47 186 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ZFP64Q9NPA5 681 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ASH2LQ9UBL3 628 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 UPB1Q9UBR1 384 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ATPIF1Q9UII2 106 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ERRFI1Q9UJM3 462 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ZNF391Q9UJN7 358 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 FOXD3Q9UJU5 478 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 SLC5A6Q9Y289 635 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 A0A1B0GVC2 190 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 A6NIN4 97 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 OR6C65A6NJZ3 312 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 ZNF814B7Z6K7 855 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 STMND1H3BQB6 276 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 P2RY10O00398 339 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 LDLRAD4O15165 306 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 SMAD9O15198 467 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 DHHO43323 396 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 RAD1O60671 282 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 NDUFB6O95139 128 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 IL5P05113 134 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 CPN1P15169 458 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 TBPP20226 339 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 TCEA1P23193 301 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 PRSS3P35030 304 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 RCVRNP35243 200 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 THBS4P35443 961 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 DLSTP36957 453 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 EIF1AXP47813 144 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 GZMKP49863 264 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 ZNF121P58317 390 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 B3GALT5-AS1P59052 145 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 RPS18P62269 152 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 HIST1H3AP68431 136 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 SCRN3Q0VDG4 424 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 AIMP2Q13155 320 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 TNK1Q13470 666 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 RAB35Q15286 201 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 GSG1Q2KHT4 349 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 NRN1LQ496H8 165 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 GLYATL3Q5SZD4 288 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 HIST2H3PS2Q5TEC6 136 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 ABHD17BQ5VST6 288 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 CARD17Q5XLA6 110 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 ASPHD2Q6ICH7 369 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 CORO6Q6QEF8 472 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 HIST2H3AQ71DI3 136 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 TIPARPQ7Z3E1 657 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 ABHD12BQ7Z5M8 362 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 GLCCI1Q86VQ1 547 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 C20orf196Q8IYI0 205 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 ASCC1Q8N9N2 400 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 PLPP7Q8NBV4 271 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 OR8B12Q8NGG6 310 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 ZFAND1Q8TCF1 268 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 CAPSLQ8WWF8 208 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 PP6455Q8WZ26 134 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 SPTSSAQ969W0 71 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 FAM46BQ96A09 425 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 SLC25A28Q96A46 364 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 TMEM45BQ96B21 275 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 RNF170Q96K19 258 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 GON7Q9BXV9 100 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 RANBP3Q9H6Z4 567 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 PNRC2Q9NPJ4 139 aaKnown RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 PAQR5Q9NXK6 330 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-209ENST00000440653 RAB22AQ9UL26 194 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 SHANK1Q9Y566 2161 aa8.05□□□□□ -1.12
HDAC6-209ENST00000440653 TACC2O95359 2948 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 TRAV6A0A075B6T7 132 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 A0A0A6YYJ9 748 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 A0A0J9YW62 118 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 UBE2QL1A1L167 161 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 SNRPGP15A8MWD9 76 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-209ENST00000440653 H0YC42 278 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 TNFSF11O14788 317 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 CREBL2O60519 120 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-209ENST00000440653 MTRF1O75570 445 aaKnown RBP8.04□□□□□ -1.12
HDAC6-209ENST00000440653 ALX3O95076 343 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 IGLV3-1P01715 115 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 ALDOBP05062 364 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 MELTFP08582 738 aa8.04□□□□□ -1.12
HDAC6-209ENST00000440653 CST2P09228 141 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms