RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 IFNL4K9M1U5 179 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 APOC1P02654 83 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 MDH2P40926 338 aaKnown RBP11.55□□□□□ -0.56
LTBR-202ENST00000440421 SEC61A1P61619 476 aaKnown RBP11.55□□□□□ -0.56
LTBR-202ENST00000440421 KPNB1Q14974 876 aaKnown RBP11.55□□□□□ -0.56
LTBR-202ENST00000440421 TMEM155Q4W5P6 130 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 FAM201AQ5SY85 155 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 SLX4IPQ5VYV7 408 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 LRRN1Q6UXK5 716 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 SLC16A9Q7RTY1 509 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 PRSS45Q7RTY3 260 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 KRT77Q7Z794 578 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 TCEANCQ8N8B7 351 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 CENPNQ96H22 339 aaPredicted RBP11.55□□□□□ -0.56
LTBR-202ENST00000440421 REEP6Q96HR9 211 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 PGAM5Q96HS1 289 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 TEAD3Q99594 435 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 CIB1Q99828 191 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 SLC22A4Q9H015 551 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 OPA3Q9H6K4 179 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 SP140LQ9H930 580 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 G6PC2Q9NQR9 355 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 MRPL15Q9P015 296 aaKnown RBP11.55□□□□□ -0.56
LTBR-202ENST00000440421 ZNF319Q9P2F9 582 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 LAMP5Q9UJQ1 280 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 OAZ3Q9UMX2 235 aa11.55□□□□□ -0.56
LTBR-202ENST00000440421 LRRC30A6NM36 301 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 ZAR1LA6NP61 321 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 ANKRD30BLA7E2S9 258 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 PSMD9O00233 223 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 PHF1O43189 567 aaPredicted RBP11.54□□□□□ -0.56
LTBR-202ENST00000440421 GMDSO60547 372 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 FAM20BO75063 409 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 PNPP00491 289 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 IRF2P14316 349 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 ALOX5APP20292 161 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 POLR2IP36954 125 aaKnown RBP11.54□□□□□ -0.56
LTBR-202ENST00000440421 CD200P41217 278 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 FAM3AP98173 230 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 SRSF2Q01130 221 aaKnown RBP11.54□□□□□ -0.56
LTBR-202ENST00000440421 MPPED2Q15777 294 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 LCN1P1Q5VSP4 162 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 DCAF12L2Q5VW00 463 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 C12orf73Q69YU5 71 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 RHOUQ7L0Q8 258 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 OR52H1Q8NGJ2 320 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 OR11L1Q8NGX0 322 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 SPSB4Q96A44 273 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 IL4I1Q96RQ9 567 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 TTTY10Q9BZA0 68 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 OR10A2Q9H208 303 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 METTL17Q9H7H0 456 aaPredicted RBP11.54□□□□□ -0.56
LTBR-202ENST00000440421 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
LTBR-202ENST00000440421 H2AFY2Q9P0M6 372 aaPredicted RBP11.54□□□□□ -0.56
LTBR-202ENST00000440421 NOP16Q9Y3C1 178 aaKnown RBP11.54□□□□□ -0.56
LTBR-202ENST00000440421 LRP12Q9Y561 859 aa11.54□□□□□ -0.56
LTBR-202ENST00000440421 A0A0G2JMP0 313 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 A0A0X1KG70 313 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 CEACAM18A8MTB9 384 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 RNF212BA8MTL3 300 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 EBAG9O00559 213 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 AVPP01185 164 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 GRPP07492 148 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
LTBR-202ENST00000440421 GATA4P43694 442 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 ACTR3P61158 418 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 HOXA4Q00056 320 aaPredicted RBP11.53□□□□□ -0.56
LTBR-202ENST00000440421 C1orf87Q8N0U7 546 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 MUC20Q8N307 709 aaPredicted RBP11.53□□□□□ -0.56
LTBR-202ENST00000440421 CELF2-AS1Q8N7Q2 184 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 BOLLQ8N9W6 283 aaKnown RBP11.53□□□□□ -0.56
LTBR-202ENST00000440421 C19orf18Q8NEA5 215 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 OR4M2Q8NGB6 313 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 TMEM163Q8TC26 289 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
LTBR-202ENST00000440421 PKP2Q99959 881 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 RIBC2Q9H4K1 309 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 FN3KRPQ9HA64 309 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 TMEM165Q9HC07 324 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 ENOPH1Q9UHY7 261 aa11.53□□□□□ -0.56
LTBR-202ENST00000440421 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 LOC105371242A0A075B767 164 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.52□□□□□ -0.57
LTBR-202ENST00000440421 hCG_38984A0A1B0GV85 526 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 H3BNX3 289 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 FOXH1O75593 365 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.57
LTBR-202ENST00000440421 CFL1P23528 166 aaKnown RBP11.52□□□□□ -0.57
LTBR-202ENST00000440421 DDOSTP39656 456 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 GSK3AP49840 483 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 PSMA6P60900 246 aaKnown RBP11.52□□□□□ -0.57
LTBR-202ENST00000440421 EFNB1P98172 346 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 ZNF181Q2M3W8 571 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 NXNL2Q5VZ03 156 aa11.52□□□□□ -0.57
LTBR-202ENST00000440421 C1orf229Q6ZS94 237 aaPredicted RBP11.52□□□□□ -0.57
LTBR-202ENST00000440421 MEPCEQ7L2J0 689 aaKnown RBP11.52□□□□□ -0.57
LTBR-202ENST00000440421 DEFB108BQ8NET1 73 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms