RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 RFPL4AA6NLU0 287 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 RFPL4AL1F8VTS6 287 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 RBBP9O75884 186 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 CNR1P21554 472 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 FAUP35544 74 aaKnown RBP12.56□□□□□ -0.4
LIMD1-202ENST00000440097 DLSTP36957 453 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 SCRN3Q0VDG4 424 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 Q0VFX4 171 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 C4orf46Q504U0 113 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 MOB3CQ70IA8 216 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF546Q86UE3 836 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 RNF128Q8TEB7 428 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 WDR13Q9H1Z4 485 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 TMEM9BQ9NQ34 198 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF230Q9UIE0 474 aaPredicted RBP12.56□□□□□ -0.4
LIMD1-202ENST00000440097 TRAV8-7A0A075B6U6 113 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 DISC1C4P0D8 188 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 ATG12O94817 140 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
LIMD1-202ENST00000440097 H2BFMP0C1H6 154 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 CALCBP10092 127 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 SLC35A1P78382 337 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 MPPED2Q15777 294 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 ACER2Q5QJU3 275 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 TMPPEQ6ZT21 453 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 GTPBP8Q8N3Z3 284 aaPredicted RBP12.55□□□□□ -0.4
LIMD1-202ENST00000440097 SLC25A44Q96H78 314 aaPredicted RBP12.55□□□□□ -0.4
LIMD1-202ENST00000440097 SGCZQ96LD1 299 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
LIMD1-202ENST00000440097 A0A087WZY1 265 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 NPIPB13A6NJU9 1138 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 HSPB2A8KAH6 182 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 NPIPB4C9JG80 1138 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 MT-CO3P00414 261 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 CDAP32320 146 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 RAB13P51153 203 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 ROM1Q03395 351 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 HSPB2Q16082 182 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 HAGHLQ6PII5 290 aaPredicted RBP12.55□□□□□ -0.4
LIMD1-202ENST00000440097 OR51S1Q8NGJ8 323 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 OR14L1PQ8NHC6 308 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 C11orf40Q8WZ69 217 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 DDA1Q9BW61 102 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 DHDHQ9UQ10 334 aa12.55□□□□□ -0.4
LIMD1-202ENST00000440097 TMEM269A0A1B0GVZ9 245 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 MEIS3P1A6NDR6 274 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 PRSS44E7EML9 344 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 H7C417 338 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 TRAPPC6AO75865 159 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 LUMP51884 338 aaPredicted RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 CLDN17P56750 224 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 THEM4Q5T1C6 240 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 YRDCQ86U90 279 aaKnown RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 DND1Q8IYX4 353 aaKnown RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 PUSL1Q8N0Z8 303 aaKnown RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 NOXO1Q8NFA2 376 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 OR6N1Q8NGY5 312 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 THOC3Q96J01 351 aaKnown RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF75AQ96N20 296 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 ADAT1Q9BUB4 502 aaKnown RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 PROK2Q9HC23 129 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 MTFP1Q9UDX5 166 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 CEP295Q9C0D2 2601 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 A0A0G2JMM0 328 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 TRBV5-5A0A0J9YX44 114 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 A0A1W2PPB8 328 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 A0A1W2PRS3 328 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 KIR3DP1A8MWS1 328 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 TRAF3IP2O43734 574 aaPredicted RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 CBR3O75828 277 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 CD2P06729 351 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 ADRA2CP18825 462 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 FKBP2P26885 142 aaKnown RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 MNDAP41218 407 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 S100A12P80511 92 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 LIN37Q96GY3 246 aaPredicted RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 MRPS18BQ9Y676 258 aaKnown RBP12.54□□□□□ -0.4
LIMD1-202ENST00000440097 MGAQ8IWI9 3026 aa12.54□□□□□ -0.4
LIMD1-202ENST00000440097 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 H0YC42 278 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 AKR1C2P52895 323 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 AKR1C1Q04828 323 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 GUCA2BQ16661 112 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 HES3Q5TGS1 186 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 OR2W3Q7Z3T1 314 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 BEST3Q8N1M1 668 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
LIMD1-202ENST00000440097 EXO5Q9H790 373 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
LIMD1-202ENST00000440097 AQP7P3A6NL99 342 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 NPIPA2E9PIF3 369 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 NPIPA3F8WFD2 350 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms