RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ANOS1P23352 680 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 GPR6P46095 362 aaPredicted RBP10.02□□□□□ -0.81
HSPG2-206ENST00000439717 SRP9P49458 86 aaKnown RBP10.02□□□□□ -0.81
HSPG2-206ENST00000439717 MMP16P51512 607 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 ACTC1P68032 377 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 ACTA1P68133 377 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 FAM3AP98173 230 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 SLC3A1Q07837 685 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 ZNF691Q5VV52 312 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 CLEC9AQ6UXN8 241 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 KLBQ86Z14 1044 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 DHRSXQ8N5I4 330 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 RFLNBQ8N5W9 214 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 BHLHE23Q8NDY6 225 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 OR10H4Q8NGA5 316 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 OR8B12Q8NGG6 310 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 MOB1AQ9H8S9 216 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 RNPEPL1Q9HAU8 725 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 BRD7Q9NPI1 651 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 ZNF319Q9P2F9 582 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 EXOGQ9Y2C4 368 aaKnown RBP10.02□□□□□ -0.81
HSPG2-206ENST00000439717 IGHV4-61A0A0C4DH41 118 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 A0A0U1RQV5 110 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 hCG_38984A0A1B0GV85 526 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 METTL15A6NJ78 407 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 CLDN25C9JDP6 229 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 H0YAE9 185 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 J3QRE1 110 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 IFNL4K9M1U5 179 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 MLNRO43193 412 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 PPIHO43447 177 aaKnown RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 GMDSO60547 372 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 SULT1C4O75897 302 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 APOL3O95236 402 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 HEXAP06865 529 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 GSK3AP49840 483 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 CHN2P52757 468 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 PRSS12P56730 875 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 ADARB1P78563 741 aaKnown RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 MZT1Q08AG7 82 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 IL18R1Q13478 541 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 PLEKHG7Q6ZR37 379 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 FTMTQ8N4E7 242 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 CELF2-AS1Q8N7Q2 184 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 SPERTQ8NA61 448 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 MAPK1IP1LQ8NDC0 245 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 SETD9Q8NE22 299 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 CSNK2A3Q8NEV1 391 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 OR10AD1Q8NGE0 317 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 OR56B2PQ8NGI1 322 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 CYGBQ8WWM9 190 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 HPS1Q92902 700 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 MEGF10Q96KG7 1140 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 OR2V2Q96R30 315 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 MYCBPQ99417 103 aaPredicted RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 TBX5Q99593 518 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 SMR3AQ99954 134 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 TTTY10Q9BZA0 68 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 PBOV1Q9GZY1 135 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 GSX1Q9H4S2 264 aaPredicted RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 NKX1-2Q9UD57 310 aaPredicted RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 NUFIP1Q9UHK0 495 aaKnown RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 MRM2Q9UI43 246 aaKnown RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 RPL36Q9Y3U8 105 aaKnown RBP10.01□□□□□ -0.81
HSPG2-206ENST00000439717 R4GMQ9 66 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 MED13LQ71F56 2210 aa10.01□□□□□ -0.81
HSPG2-206ENST00000439717 CHD3Q12873 2000 aaKnown RBP10□□□□□ -0.81
HSPG2-206ENST00000439717 ANKRD30BLA7E2S9 258 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 H0YHG0 523 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 H0YL77 283 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 SRSF10O75494 262 aaKnown RBP10□□□□□ -0.81
HSPG2-206ENST00000439717 LY6G6DO95868 133 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 DBTP11182 482 aaKnown RBP10□□□□□ -0.81
HSPG2-206ENST00000439717 ATP6V1B1P15313 513 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 CA6P23280 308 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 CD200P41217 278 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 GATA4P43694 442 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 IL5RAQ01344 420 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 ZNF91Q05481 1191 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 RAB40BQ12829 278 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 OR8G1Q15617 311 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 OR8B8Q15620 311 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 TMEM249Q2WGJ8 235 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 GFOD2Q3B7J2 385 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 SPRNQ5BIV9 151 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 ZNF684Q5T5D7 378 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 SSX6Q7RTT6 188 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 KCTD20Q7Z5Y7 419 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 PEG10Q86TG7 708 aaKnown RBP10□□□□□ -0.81
HSPG2-206ENST00000439717 EGFL6Q8IUX8 553 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 ACBD7Q8N6N7 88 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 APH1BQ8WW43 257 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 ITLN1Q8WWA0 313 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 CCL17Q92583 94 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 RAB1CQ92928 201 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 ERGIC1Q969X5 290 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 LGALS12Q96DT0 336 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 TIMD4Q96H15 378 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 ADI1Q9BV57 179 aa10□□□□□ -0.81
HSPG2-206ENST00000439717 GCM1Q9NP62 436 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms