RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 WWP2O00308 870 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 TGOLN2O43493 480 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 SNNO75324 88 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 TRBC1P01850 177 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 GYPCP04921 128 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 IGF1P05019 195 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 UGT2B4P06133 528 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 CRYGCP07315 174 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 MT1HL1P0DM35 61 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 RRASP10301 218 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 DBTP11182 482 aaKnown RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 BCKDHAP12694 445 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 CCNB1P14635 433 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 PRKACAP17612 351 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 NCF2P19878 526 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 PTBP1P26599 531 aaKnown RBP eCLIP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 SAA4P35542 130 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 STK19P49842 368 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 AP3M2P53677 418 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 MAP3K7CLP57077 242 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 CBX1P83916 185 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 SRYQ05066 204 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 FUT7Q11130 342 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 IL18Q14116 193 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 RCN1Q15293 331 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 LGSNQ5TDP6 509 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 NCR3LG1Q68D85 454 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC25A25Q6KCM7 469 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 NIPAL3Q6P499 406 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 CBLN3Q6UW01 205 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 IL34Q6ZMJ4 242 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF620Q6ZNG0 422 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 TRPM8Q7Z2W7 1104 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 NET1Q7Z628 596 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 GRAMD2AQ8IUY3 354 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 C12orf56Q8IXR9 622 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 CCDC65Q8IXS2 484 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF683Q8IZ20 524 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 GCNT2Q8N0V5 402 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 CSGALNACT2Q8N6G5 542 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR4C5Q8NGB2 326 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR4M2Q8NGB6 313 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR8J1Q8NGP2 316 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR9A4Q8NGU2 314 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 ERMNQ8TAM6 284 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 FNDC8Q8TC99 324 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 GIPC3Q8TF64 312 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 NELFBQ8WX92 580 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR1E3Q8WZA6 343 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 DLX4Q92988 240 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 LRRC39Q96DD0 335 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 C12orf66Q96MD2 445 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 TTC25Q96NG3 672 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 UTP23Q9BRU9 249 aaKnown RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC39A3Q9BRY0 314 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 TUBGCP2Q9BSJ2 902 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 TIPINQ9BVW5 301 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 HCAR1Q9BXC0 346 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 GSDMCQ9BYG8 508 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 POLR3FQ9H1D9 316 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 OPN3Q9H1Y3 402 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 PARVGQ9HBI0 331 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 ADAP2Q9NPF8 381 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 LZTFL1Q9NQ48 299 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 DMAC2Q9NW81 257 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 QPCTLQ9NXS2 382 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 SPATA7Q9P0W8 599 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 DHCR7Q9UBM7 475 aaKnown RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 RNF14Q9UBS8 474 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC2A6Q9UGQ3 507 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 KIAA1257Q9ULG3 409 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 FZR1Q9UM11 496 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 B9D1Q9UPM9 204 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 FOXJ3Q9UPW0 622 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 MRPS33Q9Y291 106 aaKnown RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 N6AMT1Q9Y5N5 214 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 FKBP7Q9Y680 259 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 GMEB1Q9Y692 573 aa1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 BZW2Q9Y6E2 419 aaKnown RBP1.55□□□□□ -2.16
HMGB1P18-201ENST00000438801 UQCRHLA0A096LP55 91 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF816-ZNF321PA0A0X1KG74 233 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TTC26A0AVF1 554 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GSAPA4D1B5 854 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 RNF222A6NCQ9 220 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 HELTA6NFD8 242 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PCP4L1A6NKN8 68 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ANKRD30BLA7E2S9 258 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PP2D1A8MPX8 630 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ANKRD63C9JTQ0 380 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PPIAL4DF5H284 164 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GOLGA8SH3BPF8 625 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CLDN5O00501 218 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR7A17O14581 309 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 IMPA2O14732 288 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ALOX15BO15296 676 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC37A4O43826 429 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 MGRN1O60291 552 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF254O75437 659 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 MMP23AO75900 390 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TDP2O95551 362 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms