RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HIST1H3AP68431 136 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 PDCD1Q15116 288 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 SEC23BQ15437 767 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 DEFB112Q30KQ8 113 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 RFX4Q33E94 735 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 MIDNQ504T8 468 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 HIST2H3PS2Q5TEC6 136 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 PRAMEF6Q5VXH4 476 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 GLYATQ6IB77 296 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 SLC18B1Q6NT16 456 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 RPL13AP3Q6NVV1 102 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 HIST2H3AQ71DI3 136 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 OR6V1Q8N148 313 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 LNX2Q8N448 690 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 PNLDC1Q8NA58 520 aaKnown RBP6.47□□□□□ -1.37
VPS50-204ENST00000438395 SPERTQ8NA61 448 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 SCCPDHQ8NBX0 429 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 SDR9C7Q8NEX9 313 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 OR2T4Q8NH00 348 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 OR8S1Q8NH09 359 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 Q8TCH9 128 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 SSMEM1Q8WWF3 244 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 GATAD2BQ8WXI9 593 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 UBE2FQ969M7 185 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 C1orf147Q96MC9 270 aaPredicted RBP6.47□□□□□ -1.37
VPS50-204ENST00000438395 CCT8L2Q96SF2 557 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 TRIM15Q9C019 465 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 SLITRK2Q9H156 845 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 OPA3Q9H6K4 179 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 MARCH7Q9H992 704 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 DCAF13Q9NV06 445 aaKnown RBP6.47□□□□□ -1.37
VPS50-204ENST00000438395 C14orf119Q9NWQ9 140 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 B9D1Q9UPM9 204 aa6.47□□□□□ -1.37
VPS50-204ENST00000438395 TGP01266 2768 aa6.46□□□□□ -1.37
VPS50-204ENST00000438395 MDFIC2A0A1B0GVS7 189 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 ANKRD30BLA7E2S9 258 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 SRRM5B3KS81 715 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 M0QZ24 198 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 P2RY10O00398 339 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 DCTN6O00399 190 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 TIMM23O14925 209 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 GMDSO60547 372 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 TOX4O94842 621 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FABP3P05413 133 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 SPARCP09486 303 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 GRK5P34947 590 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 CFHR2P36980 270 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 CD200P41217 278 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 PAX2Q02962 417 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 CLEC12AQ5QGZ9 265 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 SLC35F1Q5T1Q4 408 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FIP1L1Q6UN15 594 aaKnown RBP6.46□□□□□ -1.38
VPS50-204ENST00000438395 COLCA1Q6ZS62 124 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FTMTQ8N4E7 242 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 TMEM86BQ8N661 226 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FITM2Q8N6M3 262 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 RNF148Q8N7C7 305 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FAM86B1Q8N7N1 296 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 C19orf18Q8NEA5 215 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 PYURFQ96I23 114 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FAM71F1Q96KD3 344 aaPredicted RBP6.46□□□□□ -1.38
VPS50-204ENST00000438395 DHRS1Q96LJ7 313 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 NSMCE2Q96MF7 247 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FAM107BQ9H098 131 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FN3KQ9H479 309 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 CCDC134Q9H6E4 229 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 ABCD2Q9UBJ2 740 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 CYB5R1Q9UHQ9 305 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 FAM96BQ9Y3D0 163 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 N6AMT1Q9Y5N5 214 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 POMT1Q9Y6A1 747 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 ARHGAP32A7KAX9 2087 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 TANC2Q9HCD6 1990 aa6.46□□□□□ -1.38
VPS50-204ENST00000438395 OOEPA6NGQ2 149 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 RIIAD1A6NNX1 92 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 ZNF879B4DU55 563 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 C22orf46C9J442 243 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 BHLHE40O14503 412 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 TBX1O43435 398 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 KCNAB3O43448 404 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 XRCC2O43543 280 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 GRPP07492 148 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 PRDX6P30041 224 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 RRM2P31350 389 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 PYCR1P32322 319 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 GNALP38405 381 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 SLC15A1P46059 708 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 PRKXP51817 358 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 FXYD6P3P58550 94 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 RPL15P61313 204 aaKnown RBP6.45□□□□□ -1.38
VPS50-204ENST00000438395 MXRA7P84157 204 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 DEFA6Q01524 100 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS50-204ENST00000438395 MAB21L1Q13394 359 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 MPPED2Q15777 294 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 TIGD6Q17RP2 521 aa6.45□□□□□ -1.38
VPS50-204ENST00000438395 SAMD4BQ5PRF9 694 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms