RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DCTN6O00399 190 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 TIMM23O14925 209 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 GMDSO60547 372 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 TOX4O94842 621 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 ALX3O95076 343 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FABP3P05413 133 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 SPARCP09486 303 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 GRK5P34947 590 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 CFHR2P36980 270 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 CD200P41217 278 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 PAX2Q02962 417 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 CLEC12AQ5QGZ9 265 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 SLC35F1Q5T1Q4 408 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FIP1L1Q6UN15 594 aaKnown RBP6.46□□□□□ -1.38
VPS50-203ENST00000436177 COLCA1Q6ZS62 124 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FTMTQ8N4E7 242 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 TMEM86BQ8N661 226 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FITM2Q8N6M3 262 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 RNF148Q8N7C7 305 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FAM86B1Q8N7N1 296 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 C19orf18Q8NEA5 215 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 PYURFQ96I23 114 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FAM71F1Q96KD3 344 aaPredicted RBP6.46□□□□□ -1.38
VPS50-203ENST00000436177 DHRS1Q96LJ7 313 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 NSMCE2Q96MF7 247 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 KRTAP9-9Q9BYP9 154 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 KRTAP9-4Q9BYQ2 154 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FAM107BQ9H098 131 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FN3KQ9H479 309 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 CCDC134Q9H6E4 229 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 ABCD2Q9UBJ2 740 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 CYB5R1Q9UHQ9 305 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 FAM96BQ9Y3D0 163 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 N6AMT1Q9Y5N5 214 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 POMT1Q9Y6A1 747 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 ARHGAP32A7KAX9 2087 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 TANC2Q9HCD6 1990 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 OOEPA6NGQ2 149 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 RIIAD1A6NNX1 92 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 ZNF879B4DU55 563 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 C22orf46C9J442 243 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 BHLHE40O14503 412 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 TBX1O43435 398 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 KCNAB3O43448 404 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 XRCC2O43543 280 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 GRPP07492 148 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 PRDX6P30041 224 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 RRM2P31350 389 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 PYCR1P32322 319 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 GNALP38405 381 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 SLC15A1P46059 708 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 PRKXP51817 358 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 FXYD6P3P58550 94 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 RPL15P61313 204 aaKnown RBP6.45□□□□□ -1.38
VPS50-203ENST00000436177 MXRA7P84157 204 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 DEFA6Q01524 100 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS50-203ENST00000436177 MAB21L1Q13394 359 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 MPPED2Q15777 294 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 TIGD6Q17RP2 521 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 SAMD4BQ5PRF9 694 aaKnown RBP6.45□□□□□ -1.38
VPS50-203ENST00000436177 RUSC1-AS1Q66K80 236 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 SFRP4Q6FHJ7 346 aaPredicted RBP6.45□□□□□ -1.38
VPS50-203ENST00000436177 DRAM2Q6UX65 266 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 LYPD2Q6UXB3 125 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 ZNF620Q6ZNG0 422 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 TSEN54Q7Z6J9 526 aaKnown RBP6.45□□□□□ -1.38
VPS50-203ENST00000436177 ZBTB46Q86UZ6 589 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 CMTM4Q8IZR5 234 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 CYB561A3Q8NBI2 242 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 OR56B2PQ8NGI1 322 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 OR2AE1Q8NHA4 323 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 TBC1D15Q8TC07 691 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 GNPDA2Q8TDQ7 276 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 ST8SIA4Q92187 359 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 C7orf34Q96L11 122 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 WDFY2Q96P53 400 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 CHIAQ9BZP6 476 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 SP140LQ9H930 580 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 MED4Q9NPJ6 270 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 CENPMQ9NSP4 180 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 TBC1D23Q9NUY8 699 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 ACOXLQ9NUZ1 547 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 NDE1Q9NXR1 346 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 MRPL15Q9P015 296 aaKnown RBP6.45□□□□□ -1.38
VPS50-203ENST00000436177 ONECUT1Q9UBC0 465 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 CAB39Q9Y376 341 aaPredicted RBP6.45□□□□□ -1.38
VPS50-203ENST00000436177 MMP24Q9Y5R2 645 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 CDH10Q9Y6N8 788 aa6.45□□□□□ -1.38
VPS50-203ENST00000436177 IGHV1-69DA0A0B4J2H0 117 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 A0A1B0GWJ7 208 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 OR6C68A6NDL8 312 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 TVP23AA6NH52 213 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 NKX6-3A6NJ46 265 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 ZNF878C9JN71 531 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 ARPC2O15144 300 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 KRT36O76013 467 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 NDUFA7O95182 113 aa6.44□□□□□ -1.38
VPS50-203ENST00000436177 ECDO95905 644 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms