RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NDE1Q9NXR1 346 aa8.62□□□□□ -1.03
CPNE1-214ENST00000435747 CDH10Q9Y6N8 788 aa8.62□□□□□ -1.03
CPNE1-214ENST00000435747 STARD9Q9P2P6 4700 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 IQCF6A8MYZ5 107 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 TSPAN9O75954 239 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 GASTP01350 101 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 IGHV4-59P01825 116 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-214ENST00000435747 MMP16P51512 607 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 PAX2Q02962 417 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.61□□□□□ -1.03
CPNE1-214ENST00000435747 ZMYND11Q15326 602 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 TMEM155Q4W5P6 130 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 DNM1P34Q6PK57 102 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 CYP2R1Q6VVX0 501 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 RASSF6Q6ZTQ3 369 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 NAA40Q86UY6 237 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 LRRC28Q86X40 367 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-214ENST00000435747 LINC00346Q8IVM7 164 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 LNX2Q8N448 690 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 OR8G5Q8NG78 346 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 OR2Z1Q8NG97 314 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 MUC7Q8TAX7 377 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 GNPDA2Q8TDQ7 276 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 ITLN1Q8WWA0 313 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 APOBEC3DQ96AK3 386 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-214ENST00000435747 MCUR1Q96AQ8 359 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 DACT3Q96B18 629 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-214ENST00000435747 OR2V2Q96R30 315 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 MAGIXQ9H6Y5 334 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 GCM1Q9NP62 436 aa8.61□□□□□ -1.03
CPNE1-214ENST00000435747 HUWE1Q7Z6Z7 4374 aaKnown RBP8.6□□□□□ -1.03
CPNE1-214ENST00000435747 IGHV2-70DA0A0C4DH43 119 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 B2RBV5 119 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 E9PQ18 207 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TMEM178BH3BS89 294 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 ACOT8O14734 319 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TNFRSF13BO14836 293 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-214ENST00000435747 FSTL3O95633 263 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 RENP00797 406 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 IGLL1P15814 213 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TNFRSF1AP19438 455 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 IFNGR2P38484 337 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 PMELP40967 661 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 BTG1P62324 171 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 GNB2P62879 340 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TRAP1Q12931 704 aaKnown RBP8.6□□□□□ -1.03
CPNE1-214ENST00000435747 PPP1R8Q12972 351 aaKnown RBP8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TRIM25Q14258 630 aaKnown RBP8.6□□□□□ -1.03
CPNE1-214ENST00000435747 GK2Q14410 553 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-214ENST00000435747 NSUN5P1Q3KNT7 163 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 CLEC12AQ5QGZ9 265 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 SLC35F1Q5T1Q4 408 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 OR2T2Q6IF00 324 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 RPL13AP3Q6NVV1 102 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 LYPD4Q6UWN0 246 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 MEPCEQ7L2J0 689 aaKnown RBP8.6□□□□□ -1.03
CPNE1-214ENST00000435747 ARHGAP24Q8N264 748 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 GALNT4Q8N4A0 578 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 LINC00471Q8N535 108 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 OR4Q3Q8NH05 313 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 RAB40AQ8WXH6 277 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 LRTOMTQ8WZ04 291 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 ATF6BQ99941 703 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TMEM165Q9HC07 324 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 PTTG3PQ9NZH4 202 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TMCC3Q9ULS5 477 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 LRCH1Q9Y2L9 728 aa8.6□□□□□ -1.03
CPNE1-214ENST00000435747 TNFRSF11BO00300 401 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 PTBP3O95758 552 aaKnown RBP8.59□□□□□ -1.03
CPNE1-214ENST00000435747 FAM107AO95990 144 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 RPS27P42677 84 aaKnown RBP8.59□□□□□ -1.03
CPNE1-214ENST00000435747 GATA4P43694 442 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 IER3P46695 156 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 MNAT1P51948 309 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 RAD23AP54725 363 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 PRSS12P56730 875 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 ECH1Q13011 328 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 MAB21L1Q13394 359 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 ZNF181Q2M3W8 571 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 LINC01590Q5TEZ4 76 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 CD300LDQ6UXZ3 194 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-214ENST00000435747 OR5AS1Q8N127 324 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 LYG1Q8N1E2 194 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 PIP4P2Q8N4L2 257 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 CYB561A3Q8NBI2 242 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 SLC37A3Q8NCC5 494 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 OR10AD1Q8NGE0 317 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 OR5L1Q8NGL2 311 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 R3HDM4Q96D70 268 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 RBMXL1Q96E39 390 aaKnown RBP8.59□□□□□ -1.03
CPNE1-214ENST00000435747 NSL1Q96IY1 281 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 MEGF10Q96KG7 1140 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 SSBP3Q9BWW4 388 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-214ENST00000435747 DGCR6LQ9BY27 220 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 C1orf21Q9H246 121 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 DPAGT1Q9H3H5 408 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 MUC13Q9H3R2 512 aa8.59□□□□□ -1.03
CPNE1-214ENST00000435747 WDR76Q9H967 626 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms