RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	ZNF43	P17038	809 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SLC35A1	P78382	337 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	H3F3A	P84243	136 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OR2F1	Q13607	317 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TAF13	Q15543	124 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM176B	Q3YBM2	270 aa	Predicted RBP	14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	LYSMD4	Q5XG99	296 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	JMJD6	Q6NYC1	403 aa	Predicted RBP	14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	GLIPR1L1	Q6UWM5	242 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HOGA1	Q86XE5	327 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PDZD9	Q8IXQ8	264 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM104	Q8NE00	496 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NICN1	Q9BSH3	213 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PFDN2	Q9UHV9	154 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SPEF1	Q9Y4P9	236 aa		14.2	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM265	A0A087WTH1	108 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145		A0A087WZY1	265 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SLC2A1	P11166	492 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FGF5	P12034	268 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SFTPD	P35247	375 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CX3CR1	P49238	355 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	GRB2	P62993	217 aa	Known RBP	14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PLAC9	Q5JTB6	97 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMPPE	Q6ZT21	453 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	DOK3	Q7L591	496 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	GALNT11	Q8NCW6	608 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	KCNG3	Q8TAE7	436 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ST8SIA2	Q92186	375 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SLC25A32	Q9H2D1	315 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CEACAM18	A8MTB9	384 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	KRBOX1	C9JBD0	128 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TP53I11	O14683	189 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CDC14B	O60729	498 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SPDEF	O95238	335 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HP	P00738	406 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HOXD4	P09016	255 aa	Predicted RBP	14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	LIPC	P11150	499 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	HIST1H1D	P16402	221 aa	Known RBP	14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OR3A4P	P47883	348 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ZNF133	P52736	654 aa	Predicted RBP	14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	LSM6	P62312	80 aa	Known RBP	14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	VAX1	Q5SQQ9	334 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FOXL2NB	Q6ZUU3	175 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NAA40	Q86UY6	237 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ZNF101	Q8IZC7	436 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	BVES	Q8NE79	360 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OR14K1	Q8NGZ2	314 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ST8SIA4	Q92187	359 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SPACA5	Q96QH8	159 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	WDR13	Q9H1Z4	485 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OCIAD1	Q9NX40	245 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NXT1	Q9UKK6	140 aa	Known RBP	14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SESN1	Q9Y6P5	492 aa		14.19	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SDK1	Q7Z5N4	2213 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	IGKV1-9	A0A0C4DH69	117 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	RNF222	A6NCQ9	220 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	DBX1	A6NMT0	343 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ZNF726	A6NNF4	738 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SULT2B1	O00204	365 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CCS	O14618	274 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	DUS4L	O95620	317 aa	Known RBP	14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	DCN	P07585	359 aa	Known RBP	14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NUP62	P37198	522 aa	Predicted RBP	14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	C10orf128	Q5T292	105 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ADAD2	Q8NCV1	583 aa	Known RBP	14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OR2I1P	Q8NGU4	316 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PPP1R1C	Q8WVI7	109 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NAT6	Q93015	286 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FBXW5	Q969U6	566 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PHB2	Q99623	299 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	RASL12	Q9NYN1	266 aa		14.18	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	BCL2L11	O43521	198 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TLX3	O43711	291 aa	Predicted RBP	14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	NR2C1	P13056	603 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM50B	P56557	158 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	IL13RA1	P78552	427 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FAM189A2	Q15884	450 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PNLIPRP3	Q17RR3	467 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TUSC1	Q2TAM9	212 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CRIP3	Q6Q6R5	217 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145		Q6ZSR3	168 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FAM57B	Q71RH2	274 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	OR4K15	Q8NH41	348 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	TMEM54	Q969K7	222 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	RAB3C	Q96E17	227 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	FAM71F1	Q96KD3	344 aa	Predicted RBP	14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	IMMP1L	Q96LU5	166 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SHARPIN	Q9H0F6	387 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PPA2	Q9H2U2	334 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	COMMD9	Q9P000	198 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145		E9PLN8	166 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	MFNG	O00587	321 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	SOCS1	O15524	211 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	MPIG6B	O95866	241 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	PRF1	P14222	555 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ALDH3B1	P43353	468 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	DHPS	P49366	369 aa	Predicted RBP	14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	ATP1B3	P54709	279 aa		14.17	□□□□□ -0.14
HLA-DQB2-231	ENST00000435145	CLDN17	P56750	224 aa		14.17	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms