RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 MRPL15Q9P015 296 aaKnown RBP16.74■□□□□ 0.27
HLA-B-250ENST00000434333 RNF7Q9UBF6 113 aa16.74■□□□□ 0.27
HLA-B-250ENST00000434333 NOP16Q9Y3C1 178 aaKnown RBP16.74■□□□□ 0.27
HLA-B-250ENST00000434333 SAMHD1Q9Y3Z3 626 aaKnown RBP16.74■□□□□ 0.27
HLA-B-250ENST00000434333 GGT3PA6NGU5 568 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 ZNF878C9JN71 531 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 ZNF593O00488 134 aaPredicted RBP16.73■□□□□ 0.27
HLA-B-250ENST00000434333 TNFRSF13BO14836 293 aaPredicted RBP16.73■□□□□ 0.27
HLA-B-250ENST00000434333 RNASE1P07998 156 aaKnown RBP16.73■□□□□ 0.27
HLA-B-250ENST00000434333 TRIM25Q14258 630 aaKnown RBP16.73■□□□□ 0.27
HLA-B-250ENST00000434333 DHFR2Q86XF0 187 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 PLPP7Q8NBV4 271 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 SPSB4Q96A44 273 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 NSL1Q96IY1 281 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 NIPSNAP1Q9BPW8 284 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 REEP1Q9H902 201 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 FN3KRPQ9HA64 309 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 CENPMQ9NSP4 180 aa16.73■□□□□ 0.27
HLA-B-250ENST00000434333 DHRS12A0PJE2 317 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 CLDN34H7C241 214 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 LGALS8O00214 317 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 SPRY1O43609 319 aaPredicted RBP16.72■□□□□ 0.27
HLA-B-250ENST00000434333 T-ENOLP0DO92 83 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 FOXL1Q12952 345 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 SLC9A3R2Q15599 337 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 SFRP4Q6FHJ7 346 aaPredicted RBP16.72■□□□□ 0.27
HLA-B-250ENST00000434333 SGMS2Q8NHU3 365 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 ZNF747Q9BV97 191 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 CMC2Q9NRP2 79 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 PCDHGB1Q9Y5G3 927 aa16.72■□□□□ 0.27
HLA-B-250ENST00000434333 MDFIC2A0A1B0GVS7 189 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 FCN3O75636 299 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 FGF12P61328 243 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 FAM98BQ52LJ0 330 aaKnown RBP16.71■□□□□ 0.27
HLA-B-250ENST00000434333 CD300LDQ6UXZ3 194 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 ZNF826PQ6ZT77 177 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 SPATC1Q76KD6 591 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 PRSS45Q7RTY3 260 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 GCSAMQ8N6F7 178 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 OR10G2Q8NGC3 310 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 OR6K6Q8NGW6 343 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 CCT8L2Q96SF2 557 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 OPA3Q9H6K4 179 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 MED20Q9H944 212 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 SMURF1Q9HCE7 757 aa16.71■□□□□ 0.27
HLA-B-250ENST00000434333 FAM183AA6NL82 134 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 C3orf80F5H4A9 247 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 XRCC2O43543 280 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 MTNR1AP48039 350 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 NPY4RP50391 375 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 TAF13Q15543 124 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 BRD3OSQ6XYD6 125 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 WDR86Q86TI4 376 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 IQCF1Q8N6M8 205 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 BOLLQ8N9W6 283 aaKnown RBP16.7■□□□□ 0.26
HLA-B-250ENST00000434333 SPERTQ8NA61 448 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 TAF15Q92804 592 aaKnown RBP eCLIP16.7■□□□□ 0.26
HLA-B-250ENST00000434333 AMELYQ99218 206 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 MMADHCQ9H3L0 296 aaPredicted RBP16.7■□□□□ 0.26
HLA-B-250ENST00000434333 PRDM13Q9H4Q3 707 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 MARCH7Q9H992 704 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 C1orf123Q9NWV4 160 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 N6AMT1Q9Y5N5 214 aa16.7■□□□□ 0.26
HLA-B-250ENST00000434333 OOEPA6NGQ2 149 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 RIIAD1A6NNX1 92 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 ENSAO43768 121 aaKnown RBP16.69■□□□□ 0.26
HLA-B-250ENST00000434333 IFNGP01579 166 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 ZNF3P17036 446 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 CALB2P22676 271 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 GRK5P34947 590 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 CX3CR1P49238 355 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 BLVRAP53004 296 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 GRB2P62993 217 aaKnown RBP16.69■□□□□ 0.26
HLA-B-250ENST00000434333 FAM3AP98173 230 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 EIF2B1Q14232 305 aaKnown RBP16.69■□□□□ 0.26
HLA-B-250ENST00000434333 KLHL12Q53G59 568 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 SLC16A9Q7RTY1 509 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 DPY19L4Q7Z388 723 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 RNF133Q8WVZ7 376 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 SGK3Q96BR1 496 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 ASB9Q96DX5 294 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 CLPTM1LQ96KA5 538 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 TECTBQ96PL2 329 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 ABHD6Q9BV23 337 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 ZNF319Q9P2F9 582 aa16.69■□□□□ 0.26
HLA-B-250ENST00000434333 PRPF19Q9UMS4 504 aaKnown RBP16.69■□□□□ 0.26
HLA-B-250ENST00000434333 ACOT8O14734 319 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 ADAM20O43506 726 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 LHBP01229 141 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 GRPP07492 148 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 RAP2AP10114 183 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 MMP9P14780 707 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 DDOSTP39656 456 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 OR8B8Q15620 311 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 KCNJ8Q15842 424 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 DEFB112Q30KQ8 113 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 FAM90A1Q86YD7 464 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 ERI1Q8IV48 349 aaKnown RBP16.68■□□□□ 0.26
HLA-B-250ENST00000434333 C11orf53Q8IXP5 236 aa16.68■□□□□ 0.26
HLA-B-250ENST00000434333 TIGD4Q8IY51 512 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms