RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZNF806P0C7X5 589 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ERGP11308 486 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 TDGF1P13385 188 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 NQO2P16083 231 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ATF6P18850 670 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SYT1P21579 422 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 F2RP25116 425 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 CD70P32970 193 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 PPICP45877 212 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 CD151P48509 253 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 TDGF1P3P51864 188 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 CLDN6P56747 220 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 PSMC5P62195 406 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 YWHAEP62258 255 aaKnown RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SLC35B1P78383 322 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 STX3Q13277 289 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ANGPT1Q15389 498 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 TAL2Q16559 108 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ATP6V1FQ16864 119 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 COA6Q5JTJ3 125 aaKnown RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 UBE2UQ5VVX9 321 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 FBXW9Q5XUX1 488 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 DUPD1Q68J44 220 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ARL9Q6T311 187 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 EPGNQ6UW88 154 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SLC35D2Q76EJ3 337 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM135Q86UB9 458 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SLC30A8Q8IWU4 369 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 NPWQ8N729 165 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 C11orf72Q8NBR9 251 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 OR11H7Q8NGC8 314 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 OR10W1Q8NGF6 305 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 OR51A7Q8NH64 312 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 OR4S2Q8NH73 311 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 MCOLN3Q8TDD5 553 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ZFP90Q8TF47 636 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ING5Q8WYH8 240 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM159Q96B96 161 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 CENPNQ96H22 339 aaPredicted RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 GLT1D1Q96MS3 346 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF681Q96N22 645 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 TAAR1Q96RJ0 339 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SH3GL3Q99963 347 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 NRIP2Q9BQI9 281 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 OSBPL11Q9BXB4 747 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SLC25A2Q9BXI2 301 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 UPF3BQ9BZI7 483 aaKnown RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 C1orf198Q9H425 327 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ARMC7Q9H6L4 198 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 REEP1Q9H902 201 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SPACA1Q9HBV2 294 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 CD209Q9NNX6 404 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 MYOZ1Q9NP98 299 aaPredicted RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 DMAP1Q9NPF5 467 aaPredicted RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF302Q9NR11 478 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF226Q9NYT6 803 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 NXT1Q9UKK6 140 aaKnown RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 MAPK8IP3Q9UPT6 1336 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 TRAV39A0A0B4J263 110 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 A0A1W2PRF3 423 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 A0A1W2PRM7 423 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 INS-IGF2F8WCM5 200 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 H7C0C1 242 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 POLR1CO15160 346 aaPredicted RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 SS18L1O75177 396 aaPredicted RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 SERPINB7O75635 380 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 RAB3DO95716 219 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 HPRT1P00492 218 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 IGLV3-19P01714 112 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 APOA1P02647 267 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 TLX1NBP0CAT3 122 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 THRAP10827 490 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 CRISP2P16562 243 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 IVDP26440 423 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 IL12BP29460 328 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 CSKP41240 450 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 RBM34P42696 430 aaKnown RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 UBE2AP49459 152 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 P2RX1P51575 399 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF121P58317 390 aaPredicted RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 RPL31P62899 125 aaKnown RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 C2orf80Q0P641 193 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 DYNC1I2Q13409 638 aaKnown RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 TFDP2Q14188 446 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 GINS1Q14691 196 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 MAD2L1BPQ15013 274 aaPredicted RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 PON2Q15165 354 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 PRSS8Q16651 343 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 PGGHGQ32M88 737 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 TSPO2Q5TGU0 170 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 PRMT9Q6P2P2 845 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM205Q6UW68 189 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 LYPD2Q6UXB3 125 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 SNX20Q7Z614 316 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 ATPAF2Q8N5M1 289 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 COX18Q8N8Q8 333 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 OR10G9Q8NGN4 311 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 OR6Q1Q8NGQ2 317 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 RGP1Q92546 391 aaPredicted RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 CDKL2Q92772 493 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms