RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CENPXA8MT69 81 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 C11orf94C9JXX5 98 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 CTRB1P17538 263 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 DTYMKP23919 212 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 UBE2MP61081 183 aaKnown RBP3.95□□□□□ -1.78
USP54-206ENST00000433394 SEMG2Q02383 582 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 MECOMQ03112 1051 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 MLIPQ5VWP3 458 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 ZNF530Q6P9A1 599 aaPredicted RBP3.95□□□□□ -1.78
USP54-206ENST00000433394 UNC93AQ86WB7 457 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 HORMAD1Q86X24 394 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 CMTM8Q8IZV2 173 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 TMEM104Q8NE00 496 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 OR56A4Q8NGH8 313 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 ZNF396Q96N95 335 aaPredicted RBP3.95□□□□□ -1.78
USP54-206ENST00000433394 WFIKKN1Q96NZ8 548 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 CYP3A43Q9HB55 503 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 SLC40A1Q9NP59 571 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 MYOZ2Q9NPC6 264 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 LHX9Q9NQ69 397 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 ADA2Q9NZK5 511 aa3.95□□□□□ -1.78
USP54-206ENST00000433394 RCL1Q9Y2P8 373 aaKnown RBP3.95□□□□□ -1.78
USP54-206ENST00000433394 BLMP54132 1417 aaPredicted RBP3.95□□□□□ -1.78
USP54-206ENST00000433394 MED1Q15648 1581 aaPredicted RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 FLT4P35916 1363 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 IGLV3-16A0A075B6K0 115 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 TRAV6A0A075B6T7 132 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 BOLA2-SMG1P6H3BVE0 249 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 PANO1I0J062 215 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 OTCP00480 354 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 MBP02144 154 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 BCHEP06276 602 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 CD3GP09693 182 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 GZMAP12544 262 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 CSNK2A2P19784 350 aaPredicted RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 RAB4AP20338 218 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 RAB5AP20339 215 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 ZNF138P52744 262 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 ZNF121P58317 390 aaPredicted RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 IRF8Q02556 426 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 CAPRIN1Q14444 709 aaKnown RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 CAVIN4Q5BKX8 364 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 TCEAL5Q5H9L2 206 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 Q8N976 141 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 ITFG1Q8TB96 612 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 NAT6Q93015 286 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 TCEAL3Q969E4 200 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 BCL7BQ9BQE9 202 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 TPK1Q9H3S4 243 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 TDRD3Q9H7E2 651 aaKnown RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 SYNDIG1Q9H7V2 258 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 EDA2RQ9HAV5 297 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 HMG20AQ9NP66 347 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 ACP6Q9NPH0 428 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 MED4Q9NPJ6 270 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 PSG8Q9UQ74 426 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 TRPM3Q9HCF6 1732 aaPredicted RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 COL22A1Q8NFW1 1626 aaPredicted RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 GAKO14976 1311 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 PIK3C2AO00443 1686 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 ALS2Q96Q42 1657 aa3.94□□□□□ -1.78
USP54-206ENST00000433394 FAM208AQ9UK61 1670 aaKnown RBP3.94□□□□□ -1.78
USP54-206ENST00000433394 NHSL1Q5SYE7 1610 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 LTBP4Q8N2S1 1624 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 IGLV1-50A0A075B6I6 118 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 ZNF701M0R085 212 aaPredicted RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 MED6O75586 246 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 ATF6P18850 670 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 PMCHP20382 165 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 NUP62P37198 522 aaPredicted RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 SLC11A1P49279 550 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 AP1S2P56377 157 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 RSPO1Q2MKA7 263 aaPredicted RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 PLET1Q6UQ28 207 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 SNX20Q7Z614 316 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 ENTHD1Q8IYW4 607 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 ZNF433Q8N7K0 673 aaPredicted RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 Q8N9L7 120 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 UBAC2Q8NBM4 344 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 OR11H7Q8NGC8 314 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 ZNF75CPQ92670 426 aaPredicted RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 RAB1CQ92928 201 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 MRGPRFQ96AM1 343 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 LRRC58Q96CX6 371 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 NRBF2Q96F24 287 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 OR2A5Q96R48 311 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 DEFB129Q9H1M3 183 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 SPNS1Q9H2V7 528 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 MYOZ1Q9NP98 299 aaPredicted RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 DDX19AQ9NUU7 478 aaKnown RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 SLIT3O75094 1523 aa3.93□□□□□ -1.78
USP54-206ENST00000433394 ZNFX1Q9P2E3 1918 aaKnown RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 MN1Q10571 1320 aaPredicted RBP3.93□□□□□ -1.78
USP54-206ENST00000433394 LTBP1Q14766 1721 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 AHDC1Q5TGY3 1603 aaPredicted RBP3.92□□□□□ -1.78
USP54-206ENST00000433394 CPDO75976 1380 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 SHPRHQ149N8 1683 aa3.92□□□□□ -1.78
USP54-206ENST00000433394 A0A096LNJ9 63 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms