RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 OR2F1Q13607 317 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 CADM3Q8N126 398 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 PTPMT1Q8WUK0 201 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 TUSC2O75896 110 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 TGM6O95932 706 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 ZFP36L2P47974 494 aaKnown RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 RPS18P62269 152 aaKnown RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 SLC9A3R2Q15599 337 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF721Q8TF20 911 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 RNF170Q96K19 258 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 TRIB1Q96RU8 372 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 PLEKHF2Q9H8W4 249 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 CRLF2Q9HC73 371 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 FABP7O15540 132 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 TLE4Q04727 773 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 LGI3Q8N145 548 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 NPEPL1Q8NDH3 523 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 HRASLSQ9HDD0 168 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 ZFP64Q9NPA5 681 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 ACKR4Q9NPB9 350 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 HOXB5P09067 269 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 PRKACAP17612 351 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 ATF1P18846 271 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 MC2RQ01718 297 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 PLGLAQ15195 96 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 SSX1Q16384 188 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 KANSL1Q7Z3B3 1105 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 OR10R2Q8NGX6 335 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 SECTM1Q8WVN6 248 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF107Q9UII5 783 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 TCFL5Q9UL49 500 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 LIMS3P0CW19 117 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 LIMS4P0CW20 117 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 OR8B8Q15620 311 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 TRIP6Q15654 476 aaKnown RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 RASL10BQ96S79 203 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 LIN7CQ9NUP9 197 aaKnown RBP10.35□□□□□ -0.75
PTCH1-208ENST00000430669 TAS2R5Q9NYW4 299 aa10.35□□□□□ -0.75
PTCH1-208ENST00000430669 F10P00742 488 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SYT9Q86SS6 491 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SLC38A6Q8IZM9 456 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 GABRG1Q8N1C3 465 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 PIGTQ969N2 578 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 MRPS24Q96EL2 167 aaKnown RBP10.34□□□□□ -0.75
PTCH1-208ENST00000430669 PRMT8Q9NR22 394 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-208ENST00000430669 BCKDHBP21953 392 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 CHATP28329 748 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SVBPQ8N300 66 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SHISA7A6NL88 538 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SMIM10L1P0DMW3 83 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SMIM21Q3B7S5 101 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 OR13C5Q8NGS8 318 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SMIM10Q96HG1 83 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 PRSS44E7EML9 344 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 F8W036 122 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 IL5P05113 134 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 FBXW12Q6X9E4 464 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SSX8Q7RTT4 187 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 MAFIPQ8WZ33 124 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 GDF15Q99988 308 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 RHNO1Q9BSD3 238 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 PLEKHA3Q9HB20 300 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 APC2O95996 2303 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SNAPINO95295 136 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 FUCA1P04066 466 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 IRF3Q14653 427 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 ARRDC1Q8N5I2 433 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 FAM71CQ8NEG0 241 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 A0A1W2PS29 197 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 OGG1O15527 345 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 RPS4Y1P22090 263 aaKnown RBP10.34□□□□□ -0.75
PTCH1-208ENST00000430669 SRP9P49458 86 aaKnown RBP10.34□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF85Q03923 595 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 RDH10Q8IZV5 341 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 OSR2Q8N2R0 312 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 DDA1Q9BW61 102 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 COQ3Q9NZJ6 369 aa10.34□□□□□ -0.75
PTCH1-208ENST00000430669 LIPT2A6NK58 231 aa10.33□□□□□ -0.75
PTCH1-208ENST00000430669 PHF1O43189 567 aaPredicted RBP10.33□□□□□ -0.75
PTCH1-208ENST00000430669 TPOP07202 933 aa10.33□□□□□ -0.75
PTCH1-208ENST00000430669 PRSS45Q7RTY3 260 aa10.33□□□□□ -0.75
PTCH1-208ENST00000430669 ZDHHC22Q8N966 263 aa10.33□□□□□ -0.75
PTCH1-208ENST00000430669 OR4D11Q8NGI4 311 aa10.33□□□□□ -0.75
PTCH1-208ENST00000430669 LILRB4Q8NHJ6 448 aa10.33□□□□□ -0.75
PTCH1-208ENST00000430669 IGHV3-15A0A0B4J1V0 119 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 PRICKLE3O43900 615 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-208ENST00000430669 ZFPL1O95159 310 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 MDH2P40926 338 aaKnown RBP10.33□□□□□ -0.76
PTCH1-208ENST00000430669 NOVA1P51513 510 aaKnown RBP10.33□□□□□ -0.76
PTCH1-208ENST00000430669 DGCR2P98153 550 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 DBPQ10586 325 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-208ENST00000430669 OPCMLQ14982 345 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 FAM219BQ5XKK7 198 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 ELP2Q6IA86 826 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 PCDHB10Q9UN67 800 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 PTGER4P35408 488 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 CDKN2AP42771 156 aaKnown RBP10.33□□□□□ -0.76
PTCH1-208ENST00000430669 OR1S2Q8NGQ3 325 aa10.33□□□□□ -0.76
PTCH1-208ENST00000430669 CT55Q8WUE5 264 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms