RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 FAM90A1Q86YD7 464 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 TEX29Q8N6K0 151 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 OR10G2Q8NGC3 310 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 OR6K6Q8NGW6 343 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 OR2T29Q8NH02 315 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 SEH1LQ96EE3 360 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 CCT8L2Q96SF2 557 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 COPS4Q9BT78 406 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 MRI1Q9BV20 369 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 MAGIXQ9H6Y5 334 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 PCDHGB1Q9Y5G3 927 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 DSCAML1Q8TD84 2053 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 TGP01266 2768 aa9.79□□□□□ -0.84
HDAC4-202ENST00000430200 IGHV3OR15-7A0A075B7D8 119 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 hCG_38984A0A1B0GV85 526 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 PRR32B1ATL7 298 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF878C9JN71 531 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 IFNL4K9M1U5 179 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF593O00488 134 aaPredicted RBP9.78□□□□□ -0.84
HDAC4-202ENST00000430200 FSTL3O95633 263 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 TFF1P04155 84 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 HKR1P10072 659 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 MMP9P14780 707 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 ZNF823P16415 610 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 PRTN3P24158 256 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 CX3CR1P49238 355 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 FGF12P61328 243 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 POU4F2Q12837 409 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 TRIM25Q14258 630 aaKnown RBP9.78□□□□□ -0.84
HDAC4-202ENST00000430200 SLC9A3R2Q15599 337 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 C9orf139Q6ZV77 190 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 SLC16A9Q7RTY1 509 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 DPY19L4Q7Z388 723 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 DHFR2Q86XF0 187 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 C11orf53Q8IXP5 236 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 TIGD4Q8IY51 512 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 CELF2-AS1Q8N7Q2 184 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 BOLLQ8N9W6 283 aaKnown RBP9.78□□□□□ -0.84
HDAC4-202ENST00000430200 BBS1Q8NFJ9 593 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 OR2T33Q8NG76 320 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 OR8B3Q8NGG8 313 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 SPRYD4Q8WW59 207 aaPredicted RBP9.78□□□□□ -0.84
HDAC4-202ENST00000430200 RAB40AQ8WXH6 277 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 SPTSSAQ969W0 71 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 SPSB4Q96A44 273 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 OR8B2Q96RD0 313 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 JMJD8Q96S16 334 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 TBX15Q96SF7 602 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 FEVQ99581 238 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 KCNJ15Q99712 375 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 NUDT16L1Q9BRJ7 211 aaKnown RBP9.78□□□□□ -0.84
HDAC4-202ENST00000430200 ABHD6Q9BV23 337 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 RASSF4Q9H2L5 321 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 CMC2Q9NRP2 79 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 CENPMQ9NSP4 180 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 NDE1Q9NXR1 346 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 DNAJC27Q9NZQ0 273 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 N6AMT1Q9Y5N5 214 aa9.78□□□□□ -0.84
HDAC4-202ENST00000430200 NOTCH1P46531 2555 aa9.77□□□□□ -0.84
HDAC4-202ENST00000430200 KIR2DS1A0A191URI9 304 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 PHYHO14832 338 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 SELENOFO60613 162 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 RNASE1P07998 156 aaKnown RBP9.77□□□□□ -0.85
HDAC4-202ENST00000430200 SELLP14151 372 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 ACKR3P25106 362 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 FMO3P31513 532 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 DLX1P56177 255 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 FAM3AP98173 230 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 MALLQ13021 153 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 EIF2B1Q14232 305 aaKnown RBP9.77□□□□□ -0.85
HDAC4-202ENST00000430200 DEFB112Q30KQ8 113 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 TEX30Q5JUR7 227 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 ERI1Q8IV48 349 aaKnown RBP9.77□□□□□ -0.85
HDAC4-202ENST00000430200 C3orf56Q8N813 242 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 OR6N2Q8NGY6 317 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 RNF133Q8WVZ7 376 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 ASB9Q96DX5 294 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 NSL1Q96IY1 281 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 TECTBQ96PL2 329 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 MMADHCQ9H3L0 296 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-202ENST00000430200 REEP1Q9H902 201 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 MARCH7Q9H992 704 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 C1orf123Q9NWV4 160 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 MRPL15Q9P015 296 aaKnown RBP9.77□□□□□ -0.85
HDAC4-202ENST00000430200 RNF7Q9UBF6 113 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 CLN8Q9UBY8 286 aa9.77□□□□□ -0.85
HDAC4-202ENST00000430200 GGT3PA6NGU5 568 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 LRRC30A6NM36 301 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 LGALS8O00214 317 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 TMPRSS2O15393 492 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 WIPF1O43516 503 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 GYPAP02724 150 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 GRPP07492 148 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 PPIAL4GP0DN37 164 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 AMY2BP19961 511 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 FPR2P25090 351 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 GRK5P34947 590 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 CFHR2P36980 270 aa9.76□□□□□ -0.85
HDAC4-202ENST00000430200 OPRL1P41146 370 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms