RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SP9P0CG40 484 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 MST1P26927 711 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 AGTR1P30556 359 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 PPP1R1AQ13522 171 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 ELAVL1Q15717 326 aaKnown RBP7.21□□□□□ -1.26
HPS4-205ENST00000429411 INPP5JQ15735 1006 aaPredicted RBP7.21□□□□□ -1.26
HPS4-205ENST00000429411 RSPO4Q2I0M5 234 aaPredicted RBP7.21□□□□□ -1.26
HPS4-205ENST00000429411 ELFN2Q5R3F8 820 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 ASCL5Q7RTU5 278 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 CCDC36Q8IYA8 594 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 PRSS33Q8NF86 280 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 OR4K15Q8NH41 348 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 TMED6Q8WW62 240 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 ASB5Q8WWX0 329 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 ASB17Q8WXJ9 295 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 FBXW5Q969U6 566 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 SCARF2Q96GP6 870 aaPredicted RBP7.21□□□□□ -1.26
HPS4-205ENST00000429411 PGAM5Q96HS1 289 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 RALGAPA1Q6GYQ0 2036 aa7.21□□□□□ -1.26
HPS4-205ENST00000429411 SLC22A23A1A5C7 686 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 MEGF11A6BM72 1044 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 D6RAR5 112 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 ZNF205O95201 554 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 PMS2P2O95744 297 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 LDOC1O95751 146 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 GAAP10253 952 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 RAB3AP20336 220 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 GABRR1P24046 479 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 ZNF93P35789 620 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 CSNK2A1P68400 391 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 NHLH1Q02575 133 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 TMEM176BQ3YBM2 270 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 TMEM244Q5VVB8 128 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 ZNF585AQ6P3V2 769 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 GLIPR1L1Q6UWM5 242 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 FAM122BQ7Z309 247 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 PEG10Q86TG7 708 aaKnown RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 TMEM17Q86X19 198 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 CSNK2A3Q8NEV1 391 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 FOXRED1Q96CU9 486 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 SEH1LQ96EE3 360 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 LRFN5Q96NI6 719 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 NPAS1Q99742 590 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 RBM24Q9BX46 236 aaKnown RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 NMNAT2Q9BZQ4 307 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 WWTR1Q9GZV5 400 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 LAT2Q9GZY6 243 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 CST11Q9H112 138 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 CHRDQ9H2X0 955 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 TXNIPQ9H3M7 391 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 CNTD2Q9H8S5 307 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 DSPP15924 2871 aaKnown RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 A0A1W2PP11 408 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 hCG_1809904A0A1W2PP81 198 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 A0A1W2PPE2 198 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 A0A1W2PR64 198 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 LINC01387J3KSC0 135 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 IL5P05113 134 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 ZNF43P17038 809 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 BMI1P35226 326 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 GNG10P50151 68 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 HSD11B2P80365 405 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 EBPQ15125 230 aaKnown RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 SGCBQ16585 318 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 GRINAQ7Z429 371 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 TMEM200AQ86VY9 491 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 PLXDC1Q8IUK5 500 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 C9orf40Q8IXQ3 194 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 OR51T1Q8NGJ9 327 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 OR6S1Q8NH40 331 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 OR1L3Q8NH93 324 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 PNPLA2Q96AD5 504 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 SLAMF6Q96DU3 332 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 SGCZQ96LD1 299 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 VN1R1Q9GZP7 353 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 NPDC1Q9NQX5 325 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 SERINC1Q9NRX5 453 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 MRPL22Q9NWU5 206 aaKnown RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 SRPK3Q9UPE1 567 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 ZNF175Q9Y473 711 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 A0A0U1RQK1 487 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 ZNF320A2RRD8 509 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 PGPEP1LA6NFU8 196 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 KRBOX1C9JBD0 128 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 H7C2Y5 167 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 NDUFS8O00217 210 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 SERPINF1P36955 418 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 CD96P40200 585 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 CLDN6P56747 220 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 STARD6P59095 220 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 FXYD4P59646 89 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 HSF1Q00613 529 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 FOXF1Q12946 379 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.2□□□□□ -1.26
HPS4-205ENST00000429411 ATPAF1Q5TC12 328 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 ADGRG3Q86Y34 549 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 UEVLDQ8IX04 471 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 SPICQ8N5J4 248 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 OR5D14Q8NGL3 314 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 STT3BQ8TCJ2 826 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms