RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SNAI3Q3KNW1 292 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 SMARCD3Q6STE5 483 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 TSEN54Q7Z6J9 526 aaKnown RBP15.06■□□□□ 0
UPK3BP1-201ENST00000428678 LNX2Q8N448 690 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 SPTSSAQ969W0 71 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 RCN3Q96D15 328 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 KRCC1Q9NPI7 259 aaPredicted RBP15.06■□□□□ 0
UPK3BP1-201ENST00000428678 PNRC2Q9NPJ4 139 aaKnown RBP15.06■□□□□ 0
UPK3BP1-201ENST00000428678 RPRD1BQ9NQG5 326 aaKnown RBP15.06■□□□□ 0
UPK3BP1-201ENST00000428678 SAR1AQ9NR31 198 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 SIRT7Q9NRC8 400 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 DNAJB11Q9UBS4 358 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 CYB5R1Q9UHQ9 305 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 AP3M1Q9Y2T2 418 aa15.06■□□□□ 0
UPK3BP1-201ENST00000428678 FAM32AQ9Y421 112 aaKnown RBP15.06■□□□□ 0
UPK3BP1-201ENST00000428678 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.05■□□□□ -0
UPK3BP1-201ENST00000428678 A0A1W2PRD5 423 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 A0A1W2PRF3 423 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 A0A1W2PRM7 423 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 ANKRD61A6NGH8 418 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 PIN1P1O15428 100 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 TROVE2P10155 538 aaKnown RBP eCLIP15.05■□□□□ -0
UPK3BP1-201ENST00000428678 EEF1B2P24534 225 aaKnown RBP15.05■□□□□ -0
UPK3BP1-201ENST00000428678 TGFBR2P37173 567 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 RFX4Q33E94 735 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 Q6ZTK2 550 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 ARPINQ7Z6K5 226 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 CMTM4Q8IZR5 234 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 SPERTQ8NA61 448 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 OR4K13Q8NH42 304 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 FANK1Q8TC84 345 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 NPRL2Q8WTW4 380 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 NSRP1Q9H0G5 558 aaKnown RBP15.05■□□□□ -0
UPK3BP1-201ENST00000428678 FN3KQ9H479 309 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 MRPL15Q9P015 296 aaKnown RBP15.05■□□□□ -0
UPK3BP1-201ENST00000428678 KAAG1Q9UBP8 84 aa15.05■□□□□ -0
UPK3BP1-201ENST00000428678 TRBV4-1A0A0J9YWV2 114 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 A0A1B0GW55 424 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 PAHP00439 452 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4L2P0CJ85 424 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4L3P0CJ86 424 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4L4P0CJ87 422 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4L5P0CJ88 424 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4L6P0CJ89 424 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4L7P0CJ90 424 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 HIST1H1CP16403 213 aaKnown RBP15.04■□□□□ -0
UPK3BP1-201ENST00000428678 GABRA5P31644 462 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 MZT1Q08AG7 82 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 SEC23BQ15437 767 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 FAM189A2Q15884 450 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 GLYATL3Q5SZD4 288 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 TEX36Q5VZQ5 186 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4L9Q6RFH8 374 aaPredicted RBP15.04■□□□□ -0
UPK3BP1-201ENST00000428678 Q6ZPA2 131 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 SLC15A3Q8IY34 581 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 GALNT4Q8N4A0 578 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 FAM162AQ96A26 154 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 MAP6Q96JE9 813 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 CCL13Q99616 98 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 PPA2Q9H2U2 334 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 C14orf119Q9NWQ9 140 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 DUX4Q9UBX2 424 aa15.04■□□□□ -0
UPK3BP1-201ENST00000428678 HMGB1P1B2RPK0 211 aaPredicted RBP15.03■□□□□ -0
UPK3BP1-201ENST00000428678 BHLHE40O14503 412 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 NPFFO15130 113 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 LHBP01229 141 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 OPN1MWP04001 364 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 OPN1MW2P0DN77 364 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 OPN1MW3P0DN78 364 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 ANOS1P23352 680 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 NOS3P29474 1203 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 SLC6A6P31641 620 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 ELF3P78545 371 aaPredicted RBP15.03■□□□□ -0
UPK3BP1-201ENST00000428678 GUCA2AQ02747 115 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 KLRD1Q13241 179 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 HERPUD1Q15011 391 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 PCK2Q16822 640 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 MICBQ29980 383 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 WDR38Q5JTN6 314 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 SLC35E4Q6ICL7 350 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 METAP1DQ6UB28 335 aaPredicted RBP15.03■□□□□ -0
UPK3BP1-201ENST00000428678 ZBTB46Q86UZ6 589 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 LY6G5BQ8NDX9 201 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 OR56B2PQ8NGI1 322 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 OR52J3Q8NH60 311 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 OR5R1Q8NH85 324 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 IFT27Q9BW83 186 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 CAPN7Q9Y6W3 813 aa15.03■□□□□ -0
UPK3BP1-201ENST00000428678 RNASEK-C17orf49H0YIS7 233 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 ZNF823P16415 610 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 SLC7A2P52569 658 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 DLX1P56177 255 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 KPRPQ5T749 579 aaPredicted RBP15.02■□□□□ -0
UPK3BP1-201ENST00000428678 SAMD5Q5TGI4 173 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 FAM216BQ8N7L0 139 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 C11orf44Q8N8P7 122 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 SDR9C7Q8NEX9 313 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 OR8S1Q8NH09 359 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 LRRC29Q8WV35 223 aa15.02■□□□□ -0
UPK3BP1-201ENST00000428678 OR52D1Q9H346 318 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms