RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 OR51I2Q9H344 312 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 SLCO1C1Q9NYB5 712 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 TMEM30CPA0ZSE6 113 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 HSPB2A8KAH6 182 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 B4GALT1P15291 398 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 AREGP15514 252 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 CEACAM3P40198 252 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 SUMO3P55854 103 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 EGR3Q06889 387 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 BTN1A1Q13410 526 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 HSPB2Q16082 182 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 ADAM5Q6NVV9 412 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 GPX8Q8TED1 209 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 SLC7A6Q92536 515 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 MARC2Q969Z3 335 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 RANGRFQ9HD47 186 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 ACOXLQ9NUZ1 547 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 FBXL4Q9UKA2 621 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 POLR2AP24928 1970 aaKnown RBP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 FITM1A5D6W6 292 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 TRABD2BA6NFA1 517 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 JTBO76095 146 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 G0S2P27469 103 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 PRRX1P54821 245 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 ZNF239Q16600 458 aaKnown RBP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 RNF151Q2KHN1 245 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 GSG1Q2KHT4 349 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 FAM109BQ6ICB4 259 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 CORO6Q6QEF8 472 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 VASH2Q86V25 355 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 Q8IYB0 196 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 DEFB124Q8NES8 71 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 RHOXF1Q8NHV9 184 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 CCL4L1Q8NHW4 92 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 RPL3LQ92901 407 aaKnown RBP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 NPTNQ9Y639 398 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 CYR61O00622 381 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 FUT6P51993 359 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 RNPS1Q15287 305 aaKnown RBP8.09□□□□□ -1.12
CTNND1-208ENST00000428599 SAXO2Q658L1 398 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 OR10R2Q8NGX6 335 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 SDF2Q99470 211 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 TNFRSF19Q9NS68 423 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 OCIAD1Q9NX40 245 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 TCFL5Q9UL49 500 aa8.09□□□□□ -1.12
CTNND1-208ENST00000428599 COL4A1P02462 1669 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ORM1P02763 201 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 T-ENOLP0DO92 83 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ZBTB25P24278 435 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 CTU2Q2VPK5 515 aaKnown RBP8.08□□□□□ -1.12
CTNND1-208ENST00000428599 AGBL4Q5VU57 503 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 FAM122BQ7Z309 247 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 TTC9Q92623 222 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ERGIC1Q969X5 290 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PLA2G12AQ9BZM1 189 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PBOV1Q9GZY1 135 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 GAL3ST2Q9H3Q3 398 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ZNF586Q9NXT0 402 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 THYN1Q9P016 225 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ZNF391Q9UJN7 358 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 URGCP-MRPS24S4R325 110 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 FGF17O60258 216 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ST6GAL1P15907 406 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 CCR6P51684 374 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PRDX4Q13162 271 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 LIPNQ5VXI9 398 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ASTLQ6HA08 431 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-208ENST00000428599 LCN15Q6UWW0 184 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ZNF788Q6ZQV5 615 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 Q6ZSR9 355 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 TEAD3Q99594 435 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 R4GMQ9 66 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 MCM3APO60318 1980 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 MYO10Q9HD67 2058 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 SYT14P1Q58G82 188 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 TOR2AQ5JU69 321 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 TMEM108Q6UXF1 575 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 TUSC5Q8IXB3 177 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 OSR2Q8N2R0 312 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 RAB1CQ92928 201 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 LHX4Q969G2 390 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ADAT1Q9BUB4 502 aaKnown RBP8.08□□□□□ -1.12
CTNND1-208ENST00000428599 DCAF16Q9NXF7 216 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 COL4A5P29400 1685 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PRSS37A4D1T9 235 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 G3V3Q6 166 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 DHHO43323 396 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ANKRD34CP0C6C1 535 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 RRASP10301 218 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 SPI1P17947 270 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PTBP1P26599 531 aaKnown RBP eCLIP8.08□□□□□ -1.122e-7■■■■□ 23.9
CTNND1-208ENST00000428599 FCGR2CP31995 323 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PXDC1Q5TGL8 231 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 LILRA6Q6PI73 481 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 SLC25A26Q70HW3 274 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 TMUB2Q71RG4 321 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 OR13D1Q8NGV5 346 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PLA2G2FQ9BZM2 168 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 CHST6Q9GZX3 395 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 TXNIPQ9H3M7 391 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms