RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 ZNF382Q96SR6 550 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 LZTS2Q9BRK4 669 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 CHAC1Q9BUX1 264 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 SPZ1Q9BXG8 430 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 RACGAP1Q9H0H5 632 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF430Q9H8G1 570 aaPredicted RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 NEK6Q9HC98 313 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 RAB20Q9NX57 234 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 CCDC59Q9P031 241 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 IFNKQ9P0W0 207 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 GCNT4Q9P109 453 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 PSG8Q9UQ74 426 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 TMEM14AQ9Y6G1 99 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 FER1L6Q2WGJ9 1857 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 ADAMTSL1Q8N6G6 1762 aa1.49□□□□□ -2.17
PTPRC-208ENST00000427110 TNS1Q9HBL0 1735 aaKnown RBP1.49□□□□□ -2.17
PTPRC-208ENST00000427110 MYH9P35579 1960 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 BRCA1P38398 1863 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 GAKO14976 1311 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 ABCB11O95342 1321 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 TRBV11-1A0A0K0K1C0 115 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 A0A1B0GW55 424 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 LYRM9A8MSI8 78 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 KLRC4O43908 158 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CDC40O60508 579 aaKnown RBP eCLIP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 KLHL41O60662 606 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 PLEKHA8P1O95397 391 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 ARG1P05089 322 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 EIF4EP06730 217 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 ADRA2AP08913 450 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 TPM1P09493 284 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 RHOXF2BP0C7M4 288 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 OR56A5P0C7T3 313 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DUX4L2P0CJ85 424 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DUX4L3P0CJ86 424 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DUX4L5P0CJ88 424 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DUX4L6P0CJ89 424 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DUX4L7P0CJ90 424 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 IGHV1-8P0DP01 117 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 MYL2P10916 166 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 IGFBP3P17936 291 aaPredicted RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 PSMC3P17980 439 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 GGT1P19440 569 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 TCN2P20062 427 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 UQCRFS1P47985 274 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 RND2P52198 227 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 C21orf59P57076 290 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 UBE2NP61088 152 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 SP4Q02446 784 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 LIPEQ05469 1076 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 SPAG1Q07617 926 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 MERTKQ12866 999 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 EIF4EBP1Q13541 118 aaPredicted RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 QPRTQ15274 297 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 OR7A5Q15622 319 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CHRNA6Q15825 494 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 ALKBH6Q3KRA9 238 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 SMUG1Q53HV7 270 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 GPR107Q5VW38 600 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 METTL21CQ5VZV1 264 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 FBXW9Q5XUX1 488 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 C22orf42Q6IC83 251 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 TTC23LQ6PF05 361 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CEMP1Q6PRD7 247 aaPredicted RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DUX4L9Q6RFH8 374 aaPredicted RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CERS6Q6ZMG9 384 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 ZNF695Q8IW36 515 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 BLIDQ8IZY5 108 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 IQCKQ8N0W5 287 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 METTL13Q8N6R0 699 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CCDC148Q8NFR7 591 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 LYPD6BQ8NI32 183 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 UBALD1Q8TB05 177 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CCDC12Q8WUD4 166 aaPredicted RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 APH1BQ8WW43 257 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 FRZBQ92765 325 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CHP1Q99653 195 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 SPNS1Q9H2V7 528 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 RPP21Q9H633 154 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 TMEM185BQ9H7F4 350 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 SYNDIG1Q9H7V2 258 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 RETNQ9HD89 108 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 CD209Q9NNX6 404 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 HMG20AQ9NP66 347 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 GPATCH2LQ9NWQ4 482 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 RMND1Q9NWS8 449 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 LYARQ9NX58 379 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 PTTG3PQ9NZH4 202 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DUX4Q9UBX2 424 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 LGALS13Q9UHV8 139 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 RWDD2AQ9UIY3 292 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 VANGL2Q9ULK5 521 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 YTHDF2Q9Y5A9 579 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 KCNE3Q9Y6H6 103 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DICER1Q9UPY3 1922 aaKnown RBP1.48□□□□□ -2.17
PTPRC-208ENST00000427110 DOCK5Q9H7D0 1870 aa1.48□□□□□ -2.17
PTPRC-208ENST00000427110 COL11A1P12107 1806 aaPredicted RBP1.47□□□□□ -2.17
PTPRC-208ENST00000427110 SIP14410 1827 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms