RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TRAV1-2A0A0B4J238 106 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 SCGB1D2O95969 90 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 SNRPCP09234 159 aaKnown RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 ARHGAP11BQ3KRB8 267 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 KDM8Q8N371 416 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 OR5AP2Q8NGF4 316 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 OR5L2Q8NGL0 311 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 PFN4Q8NHR9 129 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 ZNF501Q96CX3 271 aaPredicted RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 SMIM19Q96E16 107 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 SLC41A2Q96JW4 573 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 SLC46A1Q96NT5 459 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 CNN2Q99439 309 aaKnown RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 TRIM2Q9C040 744 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 GPR27Q9NS67 375 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 VDAC3Q9Y277 283 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 AMDHD2Q9Y303 409 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 C11orf98E9PRG8 122 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 HOXA6P31267 233 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 TRHRP34981 398 aaPredicted RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 GNALP38405 381 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 RAP1AP62834 184 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 CDK5R1Q15078 307 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 ETFRF1Q6IPR1 90 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 IL34Q6ZMJ4 242 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 ARRDC1Q8N5I2 433 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 ZNF321PQ8N8H1 164 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 HAVCR1Q96D42 359 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 DOK2O60496 412 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 ACTBP60709 375 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 ACTG1P63261 375 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 RNASE10Q5GAN6 216 aaKnown RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 ZNF385CQ66K41 422 aaPredicted RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 OR4C3Q8NH37 302 aa14.31□□□□□ -0.12
PKP4-205ENST00000426248 SEBOXQ9HB31 216 aaPredicted RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 SIDT1Q9NXL6 827 aaKnown RBP14.31□□□□□ -0.12
PKP4-205ENST00000426248 ZNF587BE7ETH6 402 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 GP1BBP13224 206 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 ACTA2P62736 377 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 EIF5AP63241 154 aaKnown RBP14.3□□□□□ -0.12
PKP4-205ENST00000426248 ACTG2P63267 376 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 MPPED2Q15777 294 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 NSUN5P2Q63ZY6 315 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 CD300LDQ6UXZ3 194 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 ZNF584Q8IVC4 421 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 SLC35F2Q8IXU6 374 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 ARL6IP6Q8N6S5 226 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 NUDT9Q9BW91 350 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 ANKRD10Q9NXR5 420 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 ADAM18Q9Y3Q7 739 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 ACKR3P25106 362 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 PKIAP61925 76 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 SHBQ15464 509 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 DHRS11Q6UWP2 260 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 GDF7Q7Z4P5 450 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 GABRG1Q8N1C3 465 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 OR56B1Q8NGI3 324 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 OR5M8Q8NGP6 311 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 PELI1Q96FA3 418 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 MARS2Q96GW9 593 aaKnown RBP14.3□□□□□ -0.12
PKP4-205ENST00000426248 BCO1Q9HAY6 547 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 BCL2L10Q9HD36 194 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 GDF2Q9UK05 429 aaPredicted RBP14.3□□□□□ -0.12
PKP4-205ENST00000426248 ZDHHC8Q9ULC8 765 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 NSG1A0A0A6YYJ2 146 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 G3V3Y1 287 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 NID1P14543 1247 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 BCORP1Q8N888 145 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 BSCL2Q96G97 398 aaPredicted RBP14.3□□□□□ -0.12
PKP4-205ENST00000426248 STACQ99469 402 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 WIF1Q9Y5W5 379 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 TIAF1O95411 115 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 CAMLGP49069 296 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 COTL1Q14019 142 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 SLC9A3R2Q15599 337 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 RHBDD2Q6NTF9 364 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 SLC23A3Q6PIS1 610 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 UNQ6494/PRO21346Q6UXR6 183 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 ZNF574Q6ZN55 896 aaPredicted RBP14.3□□□□□ -0.12
PKP4-205ENST00000426248 ZAR1Q86SH2 424 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 DEFB124Q8NES8 71 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 TMEM239Q8WW34 195 aa14.3□□□□□ -0.12
PKP4-205ENST00000426248 VSX1Q9NZR4 365 aaPredicted RBP14.3□□□□□ -0.12
PKP4-205ENST00000426248 UTS2O95399 124 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 CD53P19397 219 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 PSMB6P28072 239 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 SULT1A1P50225 295 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 PRAMEF20Q5VT98 475 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 JAGN1Q8N5M9 183 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 NUDCD2Q8WVJ2 157 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 ADAD1Q96M93 576 aaKnown RBP14.29□□□□□ -0.12
PKP4-205ENST00000426248 OR8G3PP0DMU2 310 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 SERPINF1P36955 418 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 TAS2R19P59542 299 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 RAB4BP61018 213 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 LCN10Q6JVE6 187 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 GALNT16Q8N428 558 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 PGLYRP3Q96LB9 341 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 TAF9BQ9HBM6 251 aa14.29□□□□□ -0.12
PKP4-205ENST00000426248 IL17BQ9UHF5 180 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms