RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PPP1R3CQ9UQK1 317 aa11.49□□□□□ -0.57
SNX3-204ENST00000426155 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
SNX3-204ENST00000426155 GGT3PA6NGU5 568 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 CYB5R3P00387 301 aaPredicted RBP11.48□□□□□ -0.57
SNX3-204ENST00000426155 IGHV2-70P01814 119 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 IGHV2-5P01817 119 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 CA6P23280 308 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 SLC15A1P46059 708 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 MAB21L1Q13394 359 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 MOGAT3Q86VF5 341 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 OR56B2PQ8NGI1 322 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 TEAD3Q99594 435 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 ADAT1Q9BUB4 502 aaKnown RBP11.48□□□□□ -0.57
SNX3-204ENST00000426155 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
SNX3-204ENST00000426155 BEX2Q9BXY8 128 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 TOR3AQ9H497 397 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 PPP1R3EQ9H7J1 279 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 CDC42EP3Q9UKI2 254 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 LRP12Q9Y561 859 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 NPTNQ9Y639 398 aa11.48□□□□□ -0.57
SNX3-204ENST00000426155 A0A1B0GWJ7 208 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 B4DSR2 109 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 EI24O14681 340 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 MSMBP08118 114 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 SBK2P0C263 348 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 PMELP40967 661 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 EFNB1P98172 346 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 ZMYND11Q15326 602 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 FAM201AQ5SY85 155 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 AADACL4Q5VUY2 407 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 SLC16A9Q7RTY1 509 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 TMEM163Q8TC26 289 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 SGK3Q96BR1 496 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 REEP6Q96HR9 211 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 OSBPL10Q9BXB5 764 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 GABARAPL3Q9BY60 117 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 UFSP2Q9NUQ7 469 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 HIF1ANQ9NWT6 349 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 LAMP5Q9UJQ1 280 aa11.47□□□□□ -0.57
SNX3-204ENST00000426155 WNK2Q9Y3S1 2297 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 hCG_38984A0A1B0GV85 526 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 TMEM178BH3BS89 294 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 MAGEB4O15481 346 aaPredicted RBP11.46□□□□□ -0.57
SNX3-204ENST00000426155 XRCC2O43543 280 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 ALOX5APP20292 161 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 SRP9P49458 86 aaKnown RBP11.46□□□□□ -0.57
SNX3-204ENST00000426155 DVL1P1P54792 670 aaPredicted RBP11.46□□□□□ -0.57
SNX3-204ENST00000426155 SEC61A1P61619 476 aaKnown RBP11.46□□□□□ -0.57
SNX3-204ENST00000426155 BTG1P62324 171 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 FAM3AP98173 230 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 SLC3A1Q07837 685 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 OR8G1Q15617 311 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 MPPED2Q15777 294 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 LCN1P1Q5VSP4 162 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 PEG10Q86TG7 708 aaKnown RBP11.46□□□□□ -0.57
SNX3-204ENST00000426155 GLCCI1Q86VQ1 547 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 C19orf18Q8NEA5 215 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 SPSB4Q96A44 273 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 TMEM186Q96B77 213 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 RAB39BQ96DA2 213 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 PGAM5Q96HS1 289 aa11.46□□□□□ -0.57
SNX3-204ENST00000426155 CNN2Q99439 309 aaKnown RBP11.46□□□□□ -0.57
SNX3-204ENST00000426155 FBN1P35555 2871 aaKnown RBP11.46□□□□□ -0.58
SNX3-204ENST00000426155 DNHD1Q96M86 4753 aa11.46□□□□□ -0.58
SNX3-204ENST00000426155 PLPP2O43688 288 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 APOL3O95236 402 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 ALPLP05186 524 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 FAM157CP0CG43 387 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 CD200P41217 278 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 RAD23AP54725 363 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 PSMA6P60900 246 aaKnown RBP11.45□□□□□ -0.58
SNX3-204ENST00000426155 LCN2P80188 198 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 ZIK1Q3SY52 487 aaPredicted RBP11.45□□□□□ -0.58
SNX3-204ENST00000426155 NXNL2Q5VZ03 156 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 MEPCEQ7L2J0 689 aaKnown RBP11.45□□□□□ -0.58
SNX3-204ENST00000426155 KRT77Q7Z794 578 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.45□□□□□ -0.58
SNX3-204ENST00000426155 OR8B12Q8NGG6 310 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 OR51F2Q8NH61 342 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 LYZL4Q96KX0 146 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 RBM4BQ9BQ04 359 aaKnown RBP11.45□□□□□ -0.58
SNX3-204ENST00000426155 YIPF3Q9GZM5 350 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 ADGRL4Q9HBW9 690 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 LPAR3Q9UBY5 353 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 ATRQ13535 2644 aa11.45□□□□□ -0.58
SNX3-204ENST00000426155 FAM20BO75063 409 aa11.44□□□□□ -0.58
SNX3-204ENST00000426155 RPSAP08865 295 aaKnown RBP11.44□□□□□ -0.58
SNX3-204ENST00000426155 SRD5A1P18405 259 aa11.44□□□□□ -0.58
SNX3-204ENST00000426155 ZFP36P26651 326 aaKnown RBP11.44□□□□□ -0.58
SNX3-204ENST00000426155 GSK3AP49840 483 aa11.44□□□□□ -0.58
SNX3-204ENST00000426155 SRSF2Q01130 221 aaKnown RBP11.44□□□□□ -0.58
SNX3-204ENST00000426155 MFGE8Q08431 387 aaPredicted RBP11.44□□□□□ -0.58
SNX3-204ENST00000426155 ZFP1Q6P2D0 407 aa11.44□□□□□ -0.58
SNX3-204ENST00000426155 PLEKHG7Q6ZR37 379 aa11.44□□□□□ -0.58
SNX3-204ENST00000426155 RHOUQ7L0Q8 258 aa11.44□□□□□ -0.58
SNX3-204ENST00000426155 WDR86Q86TI4 376 aa11.44□□□□□ -0.58
SNX3-204ENST00000426155 SLC35F2Q8IXU6 374 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms