RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CCSO14618 274 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 CXCL13O43927 109 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 CRTAPO75718 401 aaPredicted RBP10.19□□□□□ -0.78
UBR4-207ENST00000425413 PLATP00750 562 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 PDGFAP04085 211 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 JMJD7P0C870 316 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 CXCL2P19875 107 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 MSR1P21757 451 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 H3F3AP84243 136 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 SIGLEC14Q08ET2 396 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 OPCMLQ14982 345 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 LRRC37A5PQ49AS3 106 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 SFRP5Q5T4F7 317 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 SLC23A3Q6PIS1 610 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 RAB11FIP2Q7L804 512 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 LYPD6Q86Y78 171 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 OR5AS1Q8N127 324 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 ALKBH3Q96Q83 286 aaPredicted RBP10.19□□□□□ -0.78
UBR4-207ENST00000425413 IER2Q9BTL4 223 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 NPTNQ9Y639 398 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 MYO7BQ6PIF6 2116 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 LOC390937A0A1W2PQ73 354 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 TTLL8A6PVC2 850 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 TEX46H3BTG2 121 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 SOCS1O15524 211 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 IL5P05113 134 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 CFPP27918 469 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 NTF4P34130 210 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 RNASE10Q5GAN6 216 aaKnown RBP10.19□□□□□ -0.78
UBR4-207ENST00000425413 SPINK14Q6IE38 97 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 ADPRHL1Q8NDY3 354 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 OR2AK2Q8NG84 335 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 OR2AE1Q8NHA4 323 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 MAFIPQ8WZ33 124 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 MED30Q96HR3 178 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 C1QTNF6Q9BXI9 259 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 ZNF230Q9UIE0 474 aaPredicted RBP10.19□□□□□ -0.78
UBR4-207ENST00000425413 MAB21L2Q9Y586 359 aa10.19□□□□□ -0.78
UBR4-207ENST00000425413 POM121CA8CG34 1229 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 DHHO43323 396 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 PMS2P2O95744 297 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 PMP2P02689 132 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 OR4E1P0C645 316 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 HRH1P35367 487 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 HIST3H3Q16695 136 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 ZNF260Q3ZCT1 412 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 SIGIRRQ6IA17 410 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 SEZ6L2Q6UXD5 910 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 HDDC2Q7Z4H3 204 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 C1QL2Q7Z5L3 287 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 ZIC4Q8N9L1 334 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 ANGPTL6Q8NI99 470 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 PIGTQ969N2 578 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 FOXRED1Q96CU9 486 aaPredicted RBP10.18□□□□□ -0.78
UBR4-207ENST00000425413 SFXN2Q96NB2 322 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 DEPPQ9NTK1 212 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 EMC3Q9P0I2 261 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 A0A0A6YYD4 124 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 LINC00862A6NCI5 91 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 SNRPGP15A8MWD9 76 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 CBR3O75828 277 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 CD63P08962 238 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 SORDQ00796 357 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 SRYQ05066 204 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 ENDOGQ14249 297 aaKnown RBP10.18□□□□□ -0.78
UBR4-207ENST00000425413 ACER2Q5QJU3 275 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 ATPAF1Q5TC12 328 aaPredicted RBP10.18□□□□□ -0.78
UBR4-207ENST00000425413 C6orf15Q6UXA7 325 aaPredicted RBP10.18□□□□□ -0.78
UBR4-207ENST00000425413 BEST3Q8N1M1 668 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 TMEM229BQ8NBD8 167 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 CASTOR1Q8WTX7 329 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 SEC22AQ96IW7 307 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 ZC3H10Q96K80 434 aaKnown RBP10.18□□□□□ -0.78
UBR4-207ENST00000425413 LYZL4Q96KX0 146 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 P4HTMQ9NXG6 502 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 KCNK7Q9Y2U2 307 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 LOC400499M0QZD8 3231 aa10.18□□□□□ -0.78
UBR4-207ENST00000425413 A0A087WZY1 265 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 IGKV1-9A0A0C4DH69 117 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 LNP1A1A4G5 178 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 PINLYPA6NC86 204 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 FAM25EA8MYX2 175 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 GIPP09681 153 aaPredicted RBP10.17□□□□□ -0.78
UBR4-207ENST00000425413 CPN1P15169 458 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 POU3F2P20265 443 aaPredicted RBP10.17□□□□□ -0.78
UBR4-207ENST00000425413 PEAR1Q5VY43 1037 aaPredicted RBP10.17□□□□□ -0.78
UBR4-207ENST00000425413 SPICQ8N5J4 248 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 FBXO17Q96EF6 278 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 PIGQQ9BRB3 760 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 CRLF2Q9HC73 371 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 RDH8Q9NYR8 311 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 F5H5P2 479 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 EIF1BO60739 113 aaKnown RBP10.17□□□□□ -0.78
UBR4-207ENST00000425413 ZNF735P0CB33 412 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 B4GALT1P15291 398 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 GDF1P27539 372 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 SUCLG1P53597 346 aaKnown RBP10.17□□□□□ -0.78
UBR4-207ENST00000425413 CARD18P57730 90 aa10.17□□□□□ -0.78
UBR4-207ENST00000425413 RAP2BP61225 183 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms